Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC022418.1-201ENST00000624118 445 ntBASIC1.72□□□□□ -2.13
CCDC50Q8IVM0 AC009161.2-201ENST00000624626 138 ntBASIC1.72□□□□□ -2.13
CCDC50Q8IVM0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.72□□□□□ -2.13
CCDC50Q8IVM0 RNU4-15P-201ENST00000362613 141 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 POLHP1-201ENST00000411806 470 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AL158823.1-201ENST00000418441 478 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AC092447.3-201ENST00000426027 686 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 USP9YP29-201ENST00000445112 563 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AC132479.1-201ENST00000449160 144 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 MTND1P27-201ENST00000451117 902 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 RNU6-430P-201ENST00000517078 107 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 SNORA25.17-201ENST00000517184 124 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 MTND3P12-201ENST00000559068 328 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AGGF1P4-201ENST00000568249 801 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 NIFKP6-201ENST00000598115 845 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AC241585.2-209ENST00000638217 143 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 AL390237.1-201ENST00000404226 1415 ntBASIC1.71□□□□□ -2.14
CCDC50Q8IVM0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 SNORA8-201ENST00000384574 139 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 MIR504-201ENST00000385065 83 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC244636.1-201ENST00000421152 228 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 MTND1P26-201ENST00000440488 538 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 RNU1-98P-201ENST00000458992 160 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 MIR4528-201ENST00000577763 90 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC025754.2-201ENST00000606491 432 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC068944.2-201ENST00000610373 403 ntBASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC50Q8IVM0 ZNF680P1-201ENST00000436625 1469 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 Y_RNA.159-201ENST00000363674 87 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 RNU6-43P-201ENST00000384302 107 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 U8.13-201ENST00000390842 128 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AL031274.1-201ENST00000450334 232 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 MTND3P5-201ENST00000512798 333 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 SNORA31.16-201ENST00000516773 139 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AC103996.1-201ENST00000555468 102 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 MTATP6P3-201ENST00000581686 676 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 AC011494.1-201ENST00000596454 237 ntBASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
CCDC50Q8IVM0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 RNU6-434P-201ENST00000384376 107 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 MIR29C-201ENST00000385231 88 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 RNA5SP501-201ENST00000410990 112 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 MTCYBP8-201ENST00000422855 651 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC010975.2-201ENST00000427781 588 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 CETN4P-201ENST00000432407 469 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC022364.2-201ENST00000457963 554 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC079382.1-201ENST00000493346 557 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC145146.1-201ENST00000496370 254 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 RN7SKP219-201ENST00000516825 296 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 HSBP1P1-201ENST00000555205 166 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AL034555.1-201ENST00000604816 211 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AC008536.2-201ENST00000607284 349 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 SNORD98-201ENST00000636377 67 ntBASIC1.68□□□□□ -2.14
CCDC50Q8IVM0 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 RNU1-58P-201ENST00000362413 163 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 RNU6-266P-201ENST00000364225 107 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 RNU6-827P-201ENST00000365553 106 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 Y_RNA.381-201ENST00000365666 102 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 RNU6-606P-201ENST00000384721 111 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 RNU6-903P-201ENST00000391270 109 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 AL049545.1-201ENST00000401856 572 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 MIR1289-2-201ENST00000408360 111 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 RNU6-1245P-201ENST00000411130 106 ntBASIC1.67□□□□□ -2.14
CCDC50Q8IVM0 AL117339.3-201ENST00000418733 162 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms