Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNVU1-14-201ENST00000384770 164 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNA5SP213-201ENST00000391031 106 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 MIR548I2-201ENST00000408348 149 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 AL591043.1-201ENST00000432461 424 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 Z82188.1-201ENST00000436709 154 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 PRSS3P4-201ENST00000453323 162 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 HSPE1P25-201ENST00000455484 251 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 RNU6-572P-201ENST00000516724 80 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 MIR3133-201ENST00000583157 78 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 AC136601.2-201ENST00000604356 474 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 MIR8058-201ENST00000615737 89 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 AC027309.3-201ENST00000623419 351 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 SCARNA4-201ENST00000629045 128 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
VRK3Q8IV63 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VRK3Q8IV63 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRK3Q8IV63 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRK3Q8IV63 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRK3Q8IV63 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNU6-105P-201ENST00000363909 104 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 SNORD115-32-201ENST00000364079 82 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNU6-187P-201ENST00000384139 106 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNU6-72P-201ENST00000384285 79 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNU6-125P-201ENST00000384505 107 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 BTF3L4P2-201ENST00000392798 346 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNU2-20P-201ENST00000410425 191 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 Y_RNA.602-201ENST00000410535 92 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNU2-68P-201ENST00000410878 191 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RPL27AP8-201ENST00000424277 446 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC098614.2-201ENST00000426040 255 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC007560.1-201ENST00000426912 237 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC016700.2-201ENST00000446011 156 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 COX6CP14-201ENST00000469580 174 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RPS26P21-201ENST00000475397 348 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 KC877373.1-201ENST00000479066 408 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RPL23AP75-201ENST00000491601 451 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC107393.1-201ENST00000512403 346 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 Vault.1-201ENST00000516474 102 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 Y_RNA.683-201ENST00000516508 93 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 Y_RNA.703-201ENST00000516846 111 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 SCARNA24.2-201ENST00000516968 130 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RNA5SP165-201ENST00000517142 115 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.2□□□□□ -1.9
VRK3Q8IV63 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 MIR4782-201ENST00000577987 79 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 SNRPGP15-201ENST00000600149 222 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 RPL23AP88-201ENST00000605759 454 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 SCARNA4-202ENST00000625402 129 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC007496.3-201ENST00000624987 3443 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.2□□□□□ -1.9
VRK3Q8IV63 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VRK3Q8IV63 MIR411-201ENST00000362239 96 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 SNORA63.1-201ENST00000362493 131 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNU6-682P-201ENST00000363843 106 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNU6-290P-201ENST00000365212 101 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNY4P28-201ENST00000365281 93 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNU6-1140P-201ENST00000410517 106 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 EIF1P2-201ENST00000428233 350 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC005326.1-201ENST00000429197 123 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 SNORA31.8-201ENST00000516327 108 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 RNU6-703P-201ENST00000516946 107 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.19□□□□□ -1.9
VRK3Q8IV63 MRPS36P4-201ENST00000534436 298 ntBASIC3.19□□□□□ -1.9
VRK3Q8IV63 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms