Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 SCARNA13-201ENST00000516672 275 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 RNA5SP73-201ENST00000516744 108 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 AC090877.1-201ENST00000561418 344 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 HSPE1P5-201ENST00000561489 272 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 SNRPGP20-201ENST00000604477 205 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 AC011266.1-201ENST00000624119 3569 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 AC022336.2-201ENST00000568966 2538 ntBASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SH3RF1Q7Z6J0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 RNU1-62P-201ENST00000362599 164 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 RNU1-14P-201ENST00000362759 152 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 Y_RNA.287-201ENST00000364853 94 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 SNORA73.2-201ENST00000364946 201 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 RNU7-107P-201ENST00000459121 61 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 RN7SL585P-201ENST00000470538 280 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 RPL30P5-201ENST00000494923 336 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC099522.1-202ENST00000514718 367 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 RNA5SP360-201ENST00000516555 118 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 Y_RNA.712-201ENST00000517011 92 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC136628.3-201ENST00000521868 290 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC109810.1-201ENST00000534066 224 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC009163.5-201ENST00000575421 637 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC023043.3-201ENST00000593113 385 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC005255.1-201ENST00000593748 216 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 AC015813.6-201ENST00000624409 5808 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 LINC01355-201ENST00000566551 5444 ntBASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SH3RF1Q7Z6J0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 MIR626-201ENST00000385032 94 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AC006461.1-201ENST00000412637 326 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AC025554.1-201ENST00000505641 188 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 RNU6-436P-201ENST00000516171 114 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 RNU6-1007P-201ENST00000516586 107 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 RNU6-107P-201ENST00000516643 102 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 MIR5685-201ENST00000579080 79 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AL162713.1-201ENST00000604480 262 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AL121772.2-201ENST00000614331 297 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.76□□□□□ -1.65
SH3RF1Q7Z6J0 AL133383.2-201ENST00000622958 2336 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AL133243.3-201ENST00000617415 3004 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 Y_RNA.369-201ENST00000365568 117 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 Y_RNA.525-201ENST00000384570 113 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 RNU6-710P-201ENST00000410424 105 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 NDUFS5P4-201ENST00000412983 318 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AC006517.1-201ENST00000480485 328 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 RNU5E-3P-201ENST00000515913 68 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 RNA5SP154-201ENST00000516193 111 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 RNA5SP76-201ENST00000516277 87 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AL606490.9-201ENST00000603331 271 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 FAM27D1-201ENST00000612308 341 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 AC010329.5-201ENST00000623497 2174 ntBASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SH3RF1Q7Z6J0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 snoU2_19.4-201ENST00000364329 80 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 RNU6-1264P-201ENST00000383891 107 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 SNORA9-201ENST00000384215 133 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 MIR549A-201ENST00000385268 96 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 RNA5SP390-201ENST00000410191 113 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 RNU2-12P-201ENST00000517216 168 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 CYP4A27P-201ENST00000567218 190 ntBASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SH3RF1Q7Z6J0 AP001340.1-201ENST00000624405 217 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms