Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC080188.3-201ENST00000624842 748 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 snoU2_19.1-201ENST00000362361 80 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU4-79P-201ENST00000362764 141 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU6-252P-201ENST00000363232 107 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.288-201ENST00000364854 92 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU6-163P-201ENST00000384396 106 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC119618.1-201ENST00000434191 222 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.659-201ENST00000515994 113 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU6-885P-201ENST00000516607 104 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 EIF1P4-201ENST00000572664 335 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 MIR3664-201ENST00000579074 99 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC018926.1-201ENST00000616335 435 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU6-1010P-201ENST00000362757 107 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.100-201ENST00000363141 102 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RPS27AP8-201ENST00000452665 445 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AL049830.1-201ENST00000468034 425 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 MTCO1P31-201ENST00000506355 492 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC024589.1-201ENST00000512207 263 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU6-528P-201ENST00000516926 100 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC090502.2-201ENST00000549267 280 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AL136520.1-202ENST00000555494 763 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC011155.2-201ENST00000623202 216 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC104820.1-201ENST00000624183 307 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 ARL5AP1-201ENST00000418991 388 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AC019178.2-201ENST00000423595 505 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AC097473.1-201ENST00000508142 408 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 MIR5094-201ENST00000578766 85 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AF038458.1-201ENST00000588406 262 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 RNU6-223P-201ENST00000362830 107 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 SNORD114-19-201ENST00000363072 75 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 RNU6-348P-201ENST00000384386 107 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 SNORD89-201ENST00000390981 114 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 VPS26BP1-201ENST00000417155 755 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 ELOCP9-201ENST00000418624 239 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 MTCO2P5-201ENST00000422621 426 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AL669831.1-202ENST00000428504 417 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 TXNL1P1-201ENST00000429528 554 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 RN7SKP287-201ENST00000516546 266 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 RNU6-586P-201ENST00000517265 104 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 CENPUP1-201ENST00000526649 1202 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AP000763.2-201ENST00000540641 163 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.06□□□□□ -2.4
CSMD3Q7Z407 LARP7P2-201ENST00000575306 125 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AP003465.2-201ENST00000602571 373 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 BNIP3P31-201ENST00000604515 566 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AC092106.3-201ENST00000611308 722 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 AC019226.1-201ENST00000625666 515 ntBASIC0.06□□□□□ -2.4
CSMD3Q7Z407 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC104651.1-201ENST00000427559 735 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MTCO1P57-201ENST00000432182 261 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 USP9YP22-201ENST00000438971 294 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 LINC01399-202ENST00000458450 244 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC104417.1-201ENST00000523974 751 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AL158211.1-201ENST00000566763 763 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC090615.1-201ENST00000577519 154 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MIR3169-201ENST00000578032 83 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU6-655P-201ENST00000362858 107 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU5E-8P-201ENST00000363502 116 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU6-1019P-201ENST00000364424 107 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU4-45P-201ENST00000365469 141 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MT-TQ-201ENST00000387372 72 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU6-910P-201ENST00000390844 107 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 SNX3P1X-201ENST00000414887 175 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 COX6CP10-201ENST00000416832 224 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MTND4LP11-201ENST00000422184 280 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC244505.3-201ENST00000454598 187 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC023194.1-201ENST00000493084 308 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 RNU6-165P-201ENST00000517170 99 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MIR3678-201ENST00000578455 94 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC022432.1-201ENST00000595739 310 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC107905.1-201ENST00000616204 426 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 MIR8063-201ENST00000621930 81 ntBASIC0.05□□□□□ -2.4
CSMD3Q7Z407 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms