Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 MIR3136-201ENST00000583498 78 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC008752.3-201ENST00000588113 712 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC005786.1-201ENST00000588553 154 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SCXQ7RTU7 uc_338.5-201ENST00000611839 155 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC008993.2-201ENST00000631744 806 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC006026.1-201ENST00000444025 1803 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 MTND4P4-201ENST00000439033 1366 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 RNU4-15P-201ENST00000362613 141 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 RNU6-142P-201ENST00000384019 107 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 RNU6-1245P-201ENST00000411130 106 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 RNA5SP247-201ENST00000411181 105 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 RPL30P13-201ENST00000418873 348 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 SDAD1P3-201ENST00000427380 333 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 ISCA1P6-201ENST00000427740 390 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC073614.1-201ENST00000438690 650 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC243964.1-201ENST00000441814 261 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC079781.2-201ENST00000446424 169 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.04□□□□□ -2.24
SCXQ7RTU7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC087883.1-201ENST00000551882 391 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC104581.2-201ENST00000572227 430 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.04□□□□□ -2.24
SCXQ7RTU7 BNIP3P16-201ENST00000589779 534 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 VN1R107P-201ENST00000601784 209 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AL034555.1-201ENST00000604816 211 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC090578.1-201ENST00000604955 591 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC123912.5-201ENST00000605470 343 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.04□□□□□ -2.24
SCXQ7RTU7 AL512598.1-201ENST00000610158 273 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
SCXQ7RTU7 AL133173.2-201ENST00000614270 90 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AL590240.4-201ENST00000616908 390 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 AC130454.1-201ENST00000622948 401 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.04□□□□□ -2.24
SCXQ7RTU7 AL161722.3-201ENST00000605789 2983 ntBASIC1.04□□□□□ -2.24
SCXQ7RTU7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SCXQ7RTU7 LINC02555-201ENST00000563933 1951 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 SNORD114-6-201ENST00000364393 72 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AP1B1P2-201ENST00000416196 106 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 NCOR1P3-201ENST00000420479 303 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 HMGN2P18-201ENST00000450680 270 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC013470.1-201ENST00000453438 462 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC025465.3-201ENST00000510570 311 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 MTND3P5-201ENST00000512798 333 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 RNU6-1129P-201ENST00000515964 104 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 RNU6-410P-201ENST00000517006 107 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC109479.2-201ENST00000517842 174 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 SUB1P3-201ENST00000564581 315 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 MIR3682-201ENST00000581338 84 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 MIR4422-201ENST00000581938 83 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 MIR4781-201ENST00000585250 76 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC011458.1-201ENST00000604034 617 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 BX248123.2-201ENST00000606318 124 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SCXQ7RTU7 AC011155.2-201ENST00000623202 216 ntBASIC1.03□□□□□ -2.24
SCXQ7RTU7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.03□□□□□ -2.25
SCXQ7RTU7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SCXQ7RTU7 MIR337-201ENST00000362281 93 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU6-1141P-201ENST00000364520 107 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 Y_RNA.367-201ENST00000365544 101 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU6-26P-201ENST00000383985 107 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU6-116P-201ENST00000384042 109 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 SNORD26-201ENST00000384147 75 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU5A-2P-201ENST00000384337 116 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU6-550P-201ENST00000391057 101 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 MTCYBP2-201ENST00000407745 171 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RN7SKP101-201ENST00000411376 320 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RPS3AP3-201ENST00000411933 242 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 AL513185.2-201ENST00000425543 193 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 Z82205.1-201ENST00000428456 297 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 AL669831.1-202ENST00000428504 417 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.02□□□□□ -2.25
SCXQ7RTU7 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 GTF2IP13-201ENST00000438487 386 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.02□□□□□ -2.25
SCXQ7RTU7 MTCO1P44-201ENST00000441935 243 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.02□□□□□ -2.25
SCXQ7RTU7 MTND2P4-201ENST00000445034 1004 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 snoU13.9-201ENST00000458927 103 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 MTND5P9-201ENST00000503854 1755 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 MTND1P22-201ENST00000510572 951 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 AC005741.1-201ENST00000511094 432 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNU6-377P-201ENST00000515965 102 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 SNORD27.1-201ENST00000516319 72 ntBASIC1.02□□□□□ -2.25
SCXQ7RTU7 RNA5SP490-201ENST00000517141 136 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms