Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RNU6-270P-201ENST00000364131 105 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 Y_RNA.233-201ENST00000364407 101 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RNA5SP240-201ENST00000365355 128 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC012306.1-201ENST00000423267 114 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC078809.1-201ENST00000427601 140 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 FTH1P6-201ENST00000430768 320 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 TMSB4XP3-201ENST00000445144 114 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC091021.1-201ENST00000468051 388 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 PPIAP15-201ENST00000479662 484 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC023141.12-201ENST00000512399 199 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RNU6-346P-201ENST00000516288 111 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 CKS1BP7-201ENST00000522230 235 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 NACAP3-201ENST00000552100 481 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC104465.1-201ENST00000611365 139 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 MIR6875-201ENST00000617506 72 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 AC048347.1-201ENST00000624621 427 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 MIR3529-201ENST00000637713 78 ntBASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF111Q6ZNA4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RNA5SP479-201ENST00000364858 117 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 SNORA72.2-201ENST00000365028 127 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 Y_RNA.308-201ENST00000365043 101 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RPL21P17-201ENST00000397467 475 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 MIR548I2-201ENST00000408348 149 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC005300.1-201ENST00000428401 373 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC112220.1-201ENST00000434628 355 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 UQCRBP2-201ENST00000447827 297 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AL645939.1-201ENST00000453429 797 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AP001324.2-201ENST00000461163 319 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RNU6-966P-201ENST00000516479 104 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 SNORA31.16-201ENST00000516773 139 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RNA5SP54-201ENST00000516951 92 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AP004242.1-201ENST00000533701 349 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC021739.1-201ENST00000559631 174 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 MZT1P2-201ENST00000604387 248 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC073349.3-201ENST00000617616 186 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 U6.106-201ENST00000636360 105 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC010733.2-201ENST00000589496 5702 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 ZNF204P-201ENST00000416749 2397 ntBASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF111Q6ZNA4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 RNA5SP515-201ENST00000364570 118 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 RNU6-213P-201ENST00000384051 104 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 RNU6-804P-201ENST00000384286 107 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 MIR1193-201ENST00000408109 78 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 BPY2DP-201ENST00000422208 265 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC019205.3-201ENST00000424573 156 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC024067.1-201ENST00000426199 223 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC005042.3-201ENST00000453230 174 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 SNORD2.1-201ENST00000458762 69 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 RNU6-625P-201ENST00000459412 107 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 RPS29P26-201ENST00000477483 171 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 ACA59.2-201ENST00000517061 156 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 VN1R85P-201ENST00000601587 426 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC068831.7-201ENST00000616954 363 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 AC073308.1-201ENST00000623696 305 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 MTND5P35-201ENST00000557537 1720 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 BX322639.1-202ENST00000423987 2213 ntBASIC3.66□□□□□ -1.82
RNF111Q6ZNA4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.65□□□□□ -1.82
RNF111Q6ZNA4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF111Q6ZNA4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.65□□□□□ -1.82
RNF111Q6ZNA4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms