Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HMGB3P3-201ENST00000510526 400 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 SNORA40.12-201ENST00000516329 111 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 RNA5SP148-201ENST00000516527 94 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC034114.1-201ENST00000520293 285 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AP000763.2-201ENST00000540641 163 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 RPS3AP23-202ENST00000574601 686 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC002044.1-201ENST00000606707 158 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC009994.1-201ENST00000606889 253 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 MIR6817-201ENST00000615588 66 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AL159153.1-201ENST00000619688 317 ntBASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NHLRC1Q6VVB1 AC080100.1-201ENST00000624239 5356 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 Y_RNA.89-201ENST00000363031 102 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 SNORA72.1-201ENST00000363485 129 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 SNORA3A-201ENST00000364113 130 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 U3.12-201ENST00000364498 214 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 U3.13-201ENST00000364804 214 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 RNU6-483P-201ENST00000384088 108 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 FGF7P8-201ENST00000402994 292 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 RNU6-293P-201ENST00000411259 106 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 OOSP1P1-201ENST00000423265 274 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 CBX3P6-201ENST00000430257 527 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AL606489.2-201ENST00000433886 234 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC083798.1-201ENST00000472671 131 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 SNORA20.3-201ENST00000516880 132 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 SNORA25.17-201ENST00000517184 124 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 HMGB1P33-201ENST00000563485 527 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 APOOP1-201ENST00000604695 592 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 ELOCP5-201ENST00000604924 333 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC067747.1-201ENST00000608026 250 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC002553.4-201ENST00000616896 331 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AC104985.2-201ENST00000620598 500 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 AP000560.1-201ENST00000624150 1937 ntBASIC2.18□□□□□ -2.06
NHLRC1Q6VVB1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 SNORA80E-201ENST00000384744 137 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 RNU2-32P-201ENST00000411193 191 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 IPO7P1-201ENST00000442031 636 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 IFNA11P-201ENST00000446352 526 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC013470.1-201ENST00000453438 462 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 RNU7-138P-201ENST00000459479 64 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC104383.1-201ENST00000530297 370 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AP002770.2-201ENST00000543613 532 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AL512310.1-201ENST00000548639 172 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AC007621.1-201ENST00000604544 437 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AL359757.2-201ENST00000624309 274 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AL008636.1-201ENST00000625038 1018 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 AL354685.2-201ENST00000448218 1447 ntBASIC2.17□□□□□ -2.06
NHLRC1Q6VVB1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 CASC19-280ENST00000642102 1351 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 Y_RNA.453-201ENST00000384223 109 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 SNORA41-201ENST00000384675 132 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 MIR196B-201ENST00000384852 84 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 MT-TL1-201ENST00000386347 75 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 RNU6-908P-201ENST00000410160 94 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
NHLRC1Q6VVB1 MTCO1P20-201ENST00000425366 358 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms