Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
E4F1Q66K89 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
E4F1Q66K89 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
E4F1Q66K89 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
E4F1Q66K89 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.69□□□□□ -1.82
E4F1Q66K89 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
E4F1Q66K89 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
E4F1Q66K89 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.68□□□□□ -1.82
E4F1Q66K89 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
E4F1Q66K89 RNU6-1026P-201ENST00000384465 108 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 Y_RNA.562-201ENST00000384695 113 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AL079342.1-201ENST00000401460 267 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 RNU6-1203P-201ENST00000410703 110 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC009310.1-201ENST00000414414 451 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.68□□□□□ -1.82
E4F1Q66K89 CYCSP4-201ENST00000429682 331 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AL445305.1-201ENST00000432577 575 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 RPS15AP7-201ENST00000439294 405 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC016700.2-201ENST00000446011 156 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC016632.1-201ENST00000503994 196 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 HMGB3P17-201ENST00000504195 649 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 RNU6-1012P-201ENST00000516606 109 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC245166.1-201ENST00000521012 253 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC093331.1-201ENST00000521474 169 ntBASIC3.68□□□□□ -1.82
E4F1Q66K89 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
E4F1Q66K89 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
E4F1Q66K89 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
E4F1Q66K89 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
E4F1Q66K89 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.67□□□□□ -1.82
E4F1Q66K89 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.67□□□□□ -1.82
E4F1Q66K89 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
E4F1Q66K89 snoU2_19.2-201ENST00000363024 80 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 SNORD27-201ENST00000363981 72 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 RNU6-1141P-201ENST00000364520 107 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 SNORA36A-201ENST00000384221 132 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 SNORD115-46-201ENST00000390982 71 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 RPL21P3-201ENST00000395517 478 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 EI24P2-201ENST00000397776 1076 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 AC146507.2-201ENST00000460608 476 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 RNA5SP380-201ENST00000517190 98 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.67□□□□□ -1.82
E4F1Q66K89 AL359198.2-201ENST00000611836 194 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.67□□□□□ -1.82
E4F1Q66K89 AP001282.2-201ENST00000616149 309 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
E4F1Q66K89 RBBP8P1-201ENST00000449447 1844 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.82
E4F1Q66K89 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
E4F1Q66K89 LINC02555-201ENST00000563933 1951 ntBASIC3.67□□□□□ -1.82
E4F1Q66K89 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
E4F1Q66K89 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
E4F1Q66K89 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.66□□□□□ -1.82
E4F1Q66K89 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.66□□□□□ -1.82
E4F1Q66K89 AL356274.2-201ENST00000624379 3752 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.66□□□□□ -1.82
E4F1Q66K89 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
E4F1Q66K89 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
E4F1Q66K89 AL391987.6-201ENST00000305671 199 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 RNU5B-2P-201ENST00000363036 113 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 Y_RNA.237-201ENST00000364439 102 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 RNA5SP479-201ENST00000364858 117 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 Y_RNA.319-201ENST00000365138 92 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 RNU6-937P-201ENST00000384325 106 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 Y_RNA.515-201ENST00000384535 112 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 MIR487A-201ENST00000385009 80 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 Y_RNA.602-201ENST00000410535 92 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 EIF1P2-201ENST00000428233 350 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AL161651.1-201ENST00000440882 223 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 RPL39P29-201ENST00000447779 157 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.66□□□□□ -1.82
E4F1Q66K89 snoU13.6-201ENST00000458785 104 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.66□□□□□ -1.82
E4F1Q66K89 AP001025.1-201ENST00000486139 332 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AC104619.4-201ENST00000510773 249 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 RNU6-1114P-201ENST00000516022 107 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 DEFB108E-201ENST00000524692 240 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AP000867.2-201ENST00000532468 320 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.66□□□□□ -1.82
E4F1Q66K89 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.66□□□□□ -1.82
E4F1Q66K89 MIR5695-201ENST00000579717 85 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AC073657.2-201ENST00000605661 303 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AC141273.2-201ENST00000618989 130 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.66□□□□□ -1.82
E4F1Q66K89 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
E4F1Q66K89 AC004944.1-201ENST00000517807 3059 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 AC093831.2-201ENST00000624393 3427 ntBASIC3.66□□□□□ -1.82
E4F1Q66K89 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
E4F1Q66K89 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
E4F1Q66K89 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
E4F1Q66K89 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.65□□□□□ -1.82
E4F1Q66K89 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.65□□□□□ -1.82
E4F1Q66K89 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.82
E4F1Q66K89 RNA5SP361-201ENST00000362686 118 ntBASIC3.65□□□□□ -1.83
E4F1Q66K89 SNORD17-201ENST00000390930 237 ntBASIC3.65□□□□□ -1.83
E4F1Q66K89 WARS2P1-201ENST00000429678 537 ntBASIC3.65□□□□□ -1.83
E4F1Q66K89 AC091390.1-201ENST00000433904 331 ntBASIC3.65□□□□□ -1.83
E4F1Q66K89 AC244670.1-201ENST00000436879 112 ntBASIC3.65□□□□□ -1.83
E4F1Q66K89 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms