Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC010460.2-201ENST00000509054 677 ntBASIC-0.31□□□□□ -2.46
CCDC18Q5T9S5 AL356057.1-201ENST00000533798 831 ntBASIC-0.31□□□□□ -2.46
CCDC18Q5T9S5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.31□□□□□ -2.46
CCDC18Q5T9S5 AL590229.1-201ENST00000603497 542 ntBASIC-0.31□□□□□ -2.46
CCDC18Q5T9S5 AC016252.1-201ENST00000609721 474 ntBASIC-0.31□□□□□ -2.46
CCDC18Q5T9S5 AL603758.1-201ENST00000618654 241 ntBASIC-0.31□□□□□ -2.46
CCDC18Q5T9S5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 RNU6-48P-201ENST00000384161 107 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 RNA5SP219-201ENST00000390940 113 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 AL008629.1-201ENST00000438615 184 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 RNU6-491P-201ENST00000516099 110 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 RNA5SP67-201ENST00000516422 131 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 MIR548AX-201ENST00000580117 73 ntBASIC-0.32□□□□□ -2.46
CCDC18Q5T9S5 MIR103A1-201ENST00000362165 78 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 RNU6-654P-201ENST00000364373 107 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 MIR938-201ENST00000401216 83 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 DHFRP6-201ENST00000401776 268 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 MTND1P28-201ENST00000435623 950 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 HMGB1P29-201ENST00000505659 499 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 AC079140.3-201ENST00000511111 550 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 RNU6-840P-201ENST00000517275 65 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 AC018630.3-201ENST00000542637 96 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 AC090888.2-201ENST00000559765 1144 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 RNU6-87P-201ENST00000607561 108 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 uc_338.34-201ENST00000617467 174 ntBASIC-0.33□□□□□ -2.46
CCDC18Q5T9S5 RNU6-944P-201ENST00000364023 107 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 SNORA36.2-201ENST00000384004 127 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 RNU6-233P-201ENST00000410845 141 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 AL359704.1-201ENST00000411586 781 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 DAP3P1-201ENST00000441522 278 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 HMGN1P12-201ENST00000499125 195 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 AL513534.2-201ENST00000603836 250 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.34□□□□□ -2.46
CCDC18Q5T9S5 RNA5SP214-201ENST00000363378 118 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 SNORD114-9-201ENST00000364370 72 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 RNU4-48P-201ENST00000365559 182 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 RNU6-46P-201ENST00000383860 107 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 TXNL1P1-201ENST00000429528 554 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 RPS26P48-201ENST00000491713 339 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 AC091874.1-201ENST00000511402 339 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 AC022861.1-201ENST00000522981 663 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 AL353778.1-201ENST00000603149 408 ntBASIC-0.35□□□□□ -2.46
CCDC18Q5T9S5 AL451054.2-201ENST00000420896 202 ntBASIC-0.35□□□□□ -2.47
CCDC18Q5T9S5 AL049830.1-201ENST00000468034 425 ntBASIC-0.35□□□□□ -2.47
CCDC18Q5T9S5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.35□□□□□ -2.47
CCDC18Q5T9S5 AL031281.1-201ENST00000604049 488 ntBASIC-0.35□□□□□ -2.47
CCDC18Q5T9S5 AC021506.2-201ENST00000612354 169 ntBASIC-0.35□□□□□ -2.47
CCDC18Q5T9S5 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AC005094.1-201ENST00000440420 368 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AL162395.1-201ENST00000457882 422 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 RNU1-131P-201ENST00000458943 161 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 snoU13.27-201ENST00000459278 104 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 RPL39P38-201ENST00000467018 153 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 MIR4764-201ENST00000580680 88 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 MIR4290-201ENST00000583807 95 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AC079610.2-201ENST00000604818 690 ntBASIC-0.36□□□□□ -2.47
CCDC18Q5T9S5 AL079343.1-201ENST00000572358 1771 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 ENSAP3-201ENST00000312710 333 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 SNORA9.1-201ENST00000362412 131 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 AL132657.2-201ENST00000564417 358 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 AC073410.2-201ENST00000603240 332 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 AC011155.2-201ENST00000623202 216 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 MIR1248-201ENST00000629190 106 ntBASIC-0.37□□□□□ -2.47
CCDC18Q5T9S5 RNU6-163P-201ENST00000384396 106 ntBASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 U7.7-201ENST00000459276 60 ntBASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 AL442163.3-201ENST00000554110 156 ntBASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 AC090517.2-201ENST00000614966 680 ntBASIC-0.38□□□□□ -2.47
CCDC18Q5T9S5 LINC02555-201ENST00000563933 1951 ntBASIC-0.39□□□□□ -2.47
CCDC18Q5T9S5 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
CCDC18Q5T9S5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
CCDC18Q5T9S5 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.39□□□□□ -2.47
CCDC18Q5T9S5 RNA5SP222-201ENST00000411039 105 ntBASIC-0.39□□□□□ -2.47
CCDC18Q5T9S5 RAC1P8-201ENST00000427086 527 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms