Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORA71.1-201ENST00000364523 117 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RNU6-450P-201ENST00000364654 107 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 SET-203ENST00000372688 801 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 Y_RNA.455-201ENST00000384230 98 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RNU6-293P-201ENST00000411259 106 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 DPH3P2-201ENST00000422618 250 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RPS15AP10-201ENST00000432472 382 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AL513043.1-201ENST00000439124 535 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RPL9P9-202ENST00000466501 579 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC068781.1-201ENST00000488231 618 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RNU6-635P-201ENST00000516651 102 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC007536.1-201ENST00000533382 349 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 AC113195.1-201ENST00000579952 141 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 U4.1-201ENST00000620349 87 ntBASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC44A4Q53GD3 RNU6-527P-201ENST00000363425 104 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 Y_RNA.176-201ENST00000363815 109 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 RPL21P3-201ENST00000395517 478 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 RN7SKP58-201ENST00000411010 305 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 BMS1P22-201ENST00000414726 313 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 BX276092.3-201ENST00000424182 230 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AL365496.1-201ENST00000426885 215 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AL731563.1-201ENST00000442202 214 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 U8.20-201ENST00000459445 131 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC008571.1-201ENST00000467232 300 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 RNU6-264P-201ENST00000517134 104 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC023442.1-201ENST00000531247 422 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC109446.1-201ENST00000566172 220 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC124312.5-201ENST00000604451 268 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 SNORD58B-201ENST00000607313 66 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC005046.1-201ENST00000608515 625 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC004852.3-201ENST00000614131 326 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC44A4Q53GD3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 SNORD56.1-201ENST00000362913 68 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AL133475.1-201ENST00000404414 305 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 RN7SKP220-201ENST00000410611 288 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AC009414.1-201ENST00000427200 443 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 MTND3P9-201ENST00000429526 346 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 CBX3P6-201ENST00000430257 527 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AC022018.1-201ENST00000430685 241 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AL133396.1-201ENST00000432048 687 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 MED28P2-201ENST00000475771 317 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 RNU4-77P-201ENST00000516692 156 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AC107934.2-201ENST00000518653 310 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AL161670.1-201ENST00000554348 137 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AC091152.3-201ENST00000604227 325 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 AC002064.3-201ENST00000623448 346 ntBASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC44A4Q53GD3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AC010889.1-201ENST00000566193 2666 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 RNU1-115P-201ENST00000365329 160 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 RNU6-1318P-201ENST00000365389 103 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 U8.9-201ENST00000365667 134 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 RNU6-933P-201ENST00000384424 107 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 SNORA41-201ENST00000384675 132 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 MIR521-1-201ENST00000384902 87 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AL513475.1-201ENST00000406602 315 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 MIR1302-3-201ENST00000408128 138 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.24□□□□□ -1.89
SLC44A4Q53GD3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms