Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.80-201ENST00000362996 102 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.148-201ENST00000363557 117 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-99P-201ENST00000364721 107 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-142P-201ENST00000384019 107 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-1156P-201ENST00000410365 100 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC004383.1-201ENST00000438135 289 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC104564.1-201ENST00000493028 407 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-1045P-201ENST00000516321 107 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RNU7-4P-201ENST00000516961 62 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RNA5SP380-201ENST00000517190 98 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC009812.2-201ENST00000517657 457 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC109329.1-201ENST00000518744 317 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AL590705.4-201ENST00000532209 134 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 GNAI2P1-201ENST00000541815 315 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 uc_338.14-201ENST00000613162 166 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC040896.1-201ENST00000613819 479 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 AC007792.1-201ENST00000623023 402 ntBASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PTCHD3Q3KNS1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AP000560.1-201ENST00000624150 1937 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.158-201ENST00000363651 101 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 SNORA63C-201ENST00000364578 129 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-1286P-201ENST00000383871 107 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 RNA5SP354-201ENST00000391247 136 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 CYCSP48-201ENST00000417124 323 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AL353997.1-201ENST00000432936 108 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 OSTCP8-201ENST00000445117 448 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 RPL39P29-201ENST00000447779 157 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 RPL27AP5-201ENST00000469428 449 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AC115990.1-201ENST00000526957 301 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AC104581.2-201ENST00000572227 430 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AL355877.2-201ENST00000603670 358 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AL360085.1-201ENST00000604713 532 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AC006157.1-201ENST00000611750 366 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 AC233981.2-201ENST00000611524 1614 ntBASIC3.01□□□□□ -1.93
PTCHD3Q3KNS1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-1285P-201ENST00000363480 105 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.145-201ENST00000363527 102 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RNA5SP139-201ENST00000364340 117 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RNU4-9P-201ENST00000364951 139 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 SNORA46-201ENST00000384762 135 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 MIR625-201ENST00000385047 85 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 MIR147B-201ENST00000390185 80 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 MIR767-201ENST00000390228 109 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 MRPL42P3-201ENST00000401492 326 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RNU2-23P-201ENST00000410545 195 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC007098.1-201ENST00000420122 367 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC091179.1-201ENST00000461606 579 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RPS27P26-201ENST00000494583 239 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 GZMAP1-201ENST00000503054 631 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC016632.1-201ENST00000503994 196 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-327P-201ENST00000516270 127 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC105137.2-201ENST00000569073 466 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC092447.9-201ENST00000603395 144 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AL138825.1-201ENST00000618587 192 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PTCHD3Q3KNS1 AC103988.1-201ENST00000566382 2177 ntBASIC3□□□□□ -1.93
PTCHD3Q3KNS1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC093831.2-201ENST00000624393 3427 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC092268.1-201ENST00000342691 405 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.39-201ENST00000362620 98 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 RNU1-140P-201ENST00000365040 165 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 Y_RNA.364-201ENST00000365532 101 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 RNU6-968P-201ENST00000384076 107 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 UBA52P6-201ENST00000399822 382 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 MTND2P23-201ENST00000422990 651 ntBASIC2.99□□□□□ -1.93
PTCHD3Q3KNS1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms