Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MTND2P22-201ENST00000444325 1033 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 AL122001.1-201ENST00000457027 370 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 SNRPFP3-201ENST00000457792 225 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU7-63P-201ENST00000459054 62 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
RFX4Q33E94 RNU6-586P-201ENST00000517265 104 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
RFX4Q33E94 AC022880.1-201ENST00000534017 973 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.66□□□□□ -2.14
RFX4Q33E94 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.66□□□□□ -2.14
RFX4Q33E94 MIR4648-201ENST00000580107 72 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 AC245008.1-201ENST00000608123 476 ntBASIC1.66□□□□□ -2.14
RFX4Q33E94 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RFX4Q33E94 snoU2_19.1-201ENST00000362361 80 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 RNU6-527P-201ENST00000363425 104 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 Y_RNA.399-201ENST00000383955 105 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 MIR544A-201ENST00000384855 91 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 CBX3P9-201ENST00000402326 552 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 RNU2-66P-201ENST00000410650 161 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 RNU4-55P-201ENST00000410731 137 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX4Q33E94 AL117339.3-201ENST00000418733 162 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.65□□□□□ -2.15
RFX4Q33E94 AC243964.1-201ENST00000441814 261 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 RPL39P29-201ENST00000447779 157 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 FDX1P2-201ENST00000450769 375 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AC013470.1-201ENST00000453438 462 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AC107953.1-201ENST00000522216 297 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
RFX4Q33E94 MIR4424-201ENST00000585257 86 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.65□□□□□ -2.15
RFX4Q33E94 AL136363.2-201ENST00000604173 851 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 ELOCP5-201ENST00000604924 333 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 Z99129.1-201ENST00000612510 255 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AL354950.2-201ENST00000617939 290 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AC090517.3-201ENST00000625170 141 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.65□□□□□ -2.15
RFX4Q33E94 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.65□□□□□ -2.15
RFX4Q33E94 AC002543.1-201ENST00000299783 1954 ntBASIC1.65□□□□□ -2.15
RFX4Q33E94 MTND5P26-201ENST00000426018 1752 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RFX4Q33E94 U3.13-201ENST00000364804 214 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 RNA5SP126-201ENST00000365092 109 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 Y_RNA.409-201ENST00000383990 98 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 Y_RNA.480-201ENST00000384364 102 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 RNU6-692P-201ENST00000384496 107 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 MIR561-201ENST00000385216 97 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.64□□□□□ -2.15
RFX4Q33E94 AL445685.2-201ENST00000422551 342 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC010975.2-201ENST00000427781 588 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AL591043.1-201ENST00000432461 424 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 Z83846.1-201ENST00000446798 265 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 RNU7-167P-201ENST00000459160 62 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AL163973.1-201ENST00000484753 577 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 MTND2P33-201ENST00000506452 1031 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC010493.1-201ENST00000513479 292 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 SNORA40.12-201ENST00000516329 111 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 RNU6-405P-201ENST00000516637 110 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 AC034114.1-201ENST00000520293 285 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.64□□□□□ -2.15
RFX4Q33E94 AP003392.2-201ENST00000527269 208 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.64□□□□□ -2.15
RFX4Q33E94 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 AC091135.1-201ENST00000585943 307 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC087683.1-201ENST00000591187 441 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC243960.4-201ENST00000600532 288 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC008121.3-201ENST00000618726 433 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 AC068792.1-201ENST00000621354 417 ntBASIC1.64□□□□□ -2.15
RFX4Q33E94 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.64□□□□□ -2.15
RFX4Q33E94 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RFX4Q33E94 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
RFX4Q33E94 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
RFX4Q33E94 RNU6-1285P-201ENST00000363480 105 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AC019129.1-201ENST00000403786 261 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AL663109.1-201ENST00000411498 844 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AL158823.1-201ENST00000418441 478 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 MTCO2P18-201ENST00000457151 658 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.63□□□□□ -2.15
RFX4Q33E94 RPL30P1-201ENST00000488676 339 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 RNU6-377P-201ENST00000515965 102 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.63□□□□□ -2.15
RFX4Q33E94 CYCSP27-201ENST00000527643 293 ntBASIC1.63□□□□□ -2.15
RFX4Q33E94 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.63□□□□□ -2.15
RFX4Q33E94 AC090115.3-201ENST00000553218 849 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms