Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU6-529P-201ENST00000363383 104 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-527P-201ENST00000363425 104 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC074117.2-201ENST00000417130 397 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 MTCO2P18-201ENST00000457151 658 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AP001025.1-201ENST00000486139 332 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC105417.1-201ENST00000514691 285 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-1038P-201ENST00000516516 104 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 SNORA31.23-201ENST00000517219 133 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 CR383656.8-201ENST00000549046 145 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 PSMA3P-201ENST00000555485 635 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC004223.2-201ENST00000590309 544 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC012507.3-201ENST00000603556 477 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC096772.1-201ENST00000609146 564 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC009233.1-201ENST00000616477 371 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 RMST_4.1-201ENST00000616886 107 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 RMST_7.1-201ENST00000621935 268 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 OR5AK4P-201ENST00000635912 903 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 MIR3529-201ENST00000637713 78 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 MIR95-201ENST00000385072 81 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 RNU2-29P-201ENST00000410423 189 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AL158823.1-201ENST00000418441 478 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AC010975.2-201ENST00000427781 588 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AL365400.1-201ENST00000431854 640 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 RPL23AP6-201ENST00000446637 472 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AL356010.1-201ENST00000456364 102 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 HMGB1P29-201ENST00000505659 499 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-250P-201ENST00000516958 103 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AGGF1P4-201ENST00000568249 801 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 MIR4303-201ENST00000581299 66 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 NDUFA8P1-201ENST00000605525 367 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AC068792.1-201ENST00000621354 417 ntBASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-661P-201ENST00000362409 107 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-212P-201ENST00000362642 104 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.194-201ENST00000363985 102 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 U3.13-201ENST00000364804 214 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-517P-201ENST00000384362 110 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-434P-201ENST00000384376 107 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 RAP1BP3-201ENST00000407180 549 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC008267.5-201ENST00000424928 265 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AL589823.1-201ENST00000429577 183 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC073415.1-201ENST00000449240 153 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 GMFBP1-201ENST00000467831 427 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 SNRPGP7-201ENST00000469016 106 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 MTND3P5-201ENST00000512798 333 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC136619.2-201ENST00000563361 631 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC103987.3-201ENST00000582071 292 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC023043.2-201ENST00000589678 1026 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 VN1R80P-201ENST00000597126 338 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC008749.1-201ENST00000597650 306 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 RPL30P11-203ENST00000598995 310 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC073410.2-201ENST00000603240 332 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AL136363.2-201ENST00000604173 851 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 AC022418.1-201ENST00000624118 445 ntBASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SHROOM1Q2M3G4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-428P-201ENST00000362942 107 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 SNORD37.1-201ENST00000390968 65 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AL121601.2-201ENST00000438019 707 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 AL163973.1-201ENST00000484753 577 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 MTND2P33-201ENST00000506452 1031 ntBASIC2.11□□□□□ -2.07
SHROOM1Q2M3G4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms