Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC080078.3-201ENST00000605407 463 ntBASIC2.56□□□□□ -2
EFNB3Q15768 AC090971.5-201ENST00000621102 293 ntBASIC2.56□□□□□ -2
EFNB3Q15768 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
EFNB3Q15768 AC009541.1-201ENST00000438279 2662 ntBASIC2.56□□□□□ -2
EFNB3Q15768 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.56□□□□□ -2
EFNB3Q15768 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.56□□□□□ -2
EFNB3Q15768 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.56□□□□□ -2
EFNB3Q15768 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
EFNB3Q15768 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EFNB3Q15768 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EFNB3Q15768 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.55□□□□□ -2
EFNB3Q15768 SNORD114-19-201ENST00000363072 75 ntBASIC2.55□□□□□ -2
EFNB3Q15768 RNU6-890P-201ENST00000384121 107 ntBASIC2.55□□□□□ -2
EFNB3Q15768 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
EFNB3Q15768 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.55□□□□□ -2
EFNB3Q15768 RNU2-23P-201ENST00000410545 195 ntBASIC2.55□□□□□ -2
EFNB3Q15768 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.55□□□□□ -2
EFNB3Q15768 AC138623.1-201ENST00000418060 216 ntBASIC2.55□□□□□ -2
EFNB3Q15768 MTND5P19-201ENST00000424872 1794 ntBASIC2.55□□□□□ -2
EFNB3Q15768 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
EFNB3Q15768 MTND5P30-201ENST00000452896 1731 ntBASIC2.55□□□□□ -2
EFNB3Q15768 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
EFNB3Q15768 RN7SL20P-201ENST00000488827 297 ntBASIC2.55□□□□□ -2
EFNB3Q15768 SEM1P1-201ENST00000506694 209 ntBASIC2.55□□□□□ -2
EFNB3Q15768 RNA5SP384-201ENST00000516615 116 ntBASIC2.55□□□□□ -2
EFNB3Q15768 Y_RNA.701-201ENST00000516812 110 ntBASIC2.55□□□□□ -2
EFNB3Q15768 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.55□□□□□ -2
EFNB3Q15768 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.55□□□□□ -2
EFNB3Q15768 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EFNB3Q15768 RPL23AP88-201ENST00000605759 454 ntBASIC2.55□□□□□ -2
EFNB3Q15768 AC009318.2-201ENST00000610917 651 ntBASIC2.55□□□□□ -2
EFNB3Q15768 AC008264.2-201ENST00000610193 3731 ntBASIC2.55□□□□□ -2
EFNB3Q15768 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
EFNB3Q15768 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
EFNB3Q15768 AP000560.1-201ENST00000624150 1937 ntBASIC2.54□□□□□ -2
EFNB3Q15768 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.54□□□□□ -2
EFNB3Q15768 AL359854.1-201ENST00000614203 1594 ntBASIC2.54□□□□□ -2
EFNB3Q15768 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
EFNB3Q15768 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
EFNB3Q15768 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.54□□□□□ -2
EFNB3Q15768 SNORD50.1-201ENST00000362987 71 ntBASIC2.54□□□□□ -2
EFNB3Q15768 Y_RNA.111-201ENST00000363248 100 ntBASIC2.54□□□□□ -2
EFNB3Q15768 Y_RNA.123-201ENST00000363338 102 ntBASIC2.54□□□□□ -2
EFNB3Q15768 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
EFNB3Q15768 RNU6-1040P-201ENST00000383974 107 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AL133475.1-201ENST00000404414 305 ntBASIC2.54□□□□□ -2
EFNB3Q15768 RN7SKP61-201ENST00000410642 295 ntBASIC2.54□□□□□ -2
EFNB3Q15768 RNU2-25P-201ENST00000411041 191 ntBASIC2.54□□□□□ -2
EFNB3Q15768 EEF1A1P41-201ENST00000414667 207 ntBASIC2.54□□□□□ -2
EFNB3Q15768 CYCSP48-201ENST00000417124 323 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.54□□□□□ -2
EFNB3Q15768 BX276092.3-201ENST00000424182 230 ntBASIC2.54□□□□□ -2
EFNB3Q15768 RPL23AP50-201ENST00000434149 455 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC244505.4-201ENST00000434905 287 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC011816.1-201ENST00000441346 546 ntBASIC2.54□□□□□ -2
EFNB3Q15768 SSXP5-201ENST00000443473 287 ntBASIC2.54□□□□□ -2
EFNB3Q15768 Y_RNA.639-201ENST00000458981 102 ntBASIC2.54□□□□□ -2
EFNB3Q15768 FO393415.2-201ENST00000480085 343 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC027575.1-201ENST00000481064 460 ntBASIC2.54□□□□□ -2
EFNB3Q15768 RPL22P13-201ENST00000493291 347 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.54□□□□□ -2
EFNB3Q15768 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.54□□□□□ -2
EFNB3Q15768 SCARNA16.2-201ENST00000516520 172 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.54□□□□□ -2
EFNB3Q15768 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.54□□□□□ -2
EFNB3Q15768 AC115990.1-201ENST00000526957 301 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC016256.1-201ENST00000547971 354 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
EFNB3Q15768 MIR5696-201ENST00000578474 85 ntBASIC2.54□□□□□ -2
EFNB3Q15768 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.54□□□□□ -2
EFNB3Q15768 AL356055.1-201ENST00000602528 446 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AL137843.1-201ENST00000605078 385 ntBASIC2.54□□□□□ -2
EFNB3Q15768 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.54□□□□□ -2
EFNB3Q15768 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
EFNB3Q15768 AC092608.2-201ENST00000624427 218 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC006386.2-201ENST00000624491 75 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC012005.1-201ENST00000624575 75 ntBASIC2.54□□□□□ -2
EFNB3Q15768 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
EFNB3Q15768 ZNF299P-201ENST00000406845 1804 ntBASIC2.54□□□□□ -2
EFNB3Q15768 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
EFNB3Q15768 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.54□□□□□ -2
EFNB3Q15768 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
EFNB3Q15768 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
EFNB3Q15768 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.53□□□□□ -2
EFNB3Q15768 SNORA9.2-201ENST00000365361 133 ntBASIC2.53□□□□□ -2
EFNB3Q15768 SNORD42.2-201ENST00000365570 69 ntBASIC2.53□□□□□ -2
EFNB3Q15768 RNU6-142P-201ENST00000384019 107 ntBASIC2.53□□□□□ -2
EFNB3Q15768 RNU6-331P-201ENST00000384724 107 ntBASIC2.53□□□□□ -2
EFNB3Q15768 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.53□□□□□ -2
EFNB3Q15768 MIR1302-11-201ENST00000408051 138 ntBASIC2.53□□□□□ -2
EFNB3Q15768 MIR1302-9-201ENST00000408365 138 ntBASIC2.53□□□□□ -2
EFNB3Q15768 MIR1302-10-201ENST00000408734 138 ntBASIC2.53□□□□□ -2
EFNB3Q15768 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
EFNB3Q15768 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.53□□□□□ -2
EFNB3Q15768 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.53□□□□□ -2
EFNB3Q15768 MTCO2P12-201ENST00000427426 682 ntBASIC2.53□□□□□ -2
EFNB3Q15768 AC078809.1-201ENST00000427601 140 ntBASIC2.53□□□□□ -2
EFNB3Q15768 AC007677.1-201ENST00000445757 515 ntBASIC2.53□□□□□ -2
EFNB3Q15768 AC079354.2-201ENST00000453523 154 ntBASIC2.53□□□□□ -2
EFNB3Q15768 RPL30P12-201ENST00000474666 353 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms