Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 SNORD3E-202ENST00000627253 216 ntBASIC-0.7□□□□□ -2.52
TFF3Q07654 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
TFF3Q07654 SNORD118-201ENST00000363593 134 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 RNU6-793P-201ENST00000384233 104 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 VPS26BP1-201ENST00000417155 755 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 SEPT7P5-201ENST00000434048 306 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 SEPT7P4-201ENST00000437076 306 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.71□□□□□ -2.52
TFF3Q07654 RNU7-90P-201ENST00000459216 62 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 SNORA25.11-201ENST00000515935 105 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 RNA5SP437-201ENST00000517249 129 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.71□□□□□ -2.52
TFF3Q07654 AC112693.2-201ENST00000556538 232 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 AC117490.2-201ENST00000610042 594 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 AL109620.1-201ENST00000618738 1197 ntBASIC-0.71□□□□□ -2.52
TFF3Q07654 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.71□□□□□ -2.52
TFF3Q07654 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.71□□□□□ -2.52
TFF3Q07654 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 RNU6-160P-201ENST00000384591 107 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 MIR610-201ENST00000385139 96 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 MTATP6P23-201ENST00000440153 476 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 AC136618.2-201ENST00000575091 400 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 AC012213.3-201ENST00000577199 777 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.72□□□□□ -2.52
TFF3Q07654 AL031281.1-201ENST00000604049 488 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 AL031176.1-201ENST00000604554 466 ntBASIC-0.72□□□□□ -2.52
TFF3Q07654 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.72□□□□□ -2.52
TFF3Q07654 SNORA18.1-201ENST00000363418 128 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 MIR514A1-201ENST00000385133 98 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 MTND1P20-201ENST00000430341 950 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 RPL17P35-201ENST00000432217 549 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 SNORD126-201ENST00000459475 77 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.73□□□□□ -2.53
TFF3Q07654 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.73□□□□□ -2.53
TFF3Q07654 AC109810.1-201ENST00000534066 224 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.73□□□□□ -2.53
TFF3Q07654 MIR3167-201ENST00000579623 85 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 AC112220.2-201ENST00000605513 533 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 AC119674.1-220ENST00000641502 1048 ntBASIC-0.73□□□□□ -2.53
TFF3Q07654 RNU5A-1-201ENST00000362698 116 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 RNY3P5-201ENST00000384127 102 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 MIR145-201ENST00000384967 88 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 AC016909.1-201ENST00000415916 166 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 MTND2P21-201ENST00000436242 1042 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 AL096829.2-201ENST00000446582 742 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.74□□□□□ -2.53
TFF3Q07654 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.74□□□□□ -2.53
TFF3Q07654 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.74□□□□□ -2.53
TFF3Q07654 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.74□□□□□ -2.53
TFF3Q07654 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.74□□□□□ -2.53
TFF3Q07654 AL591926.4-201ENST00000616895 298 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 AC018926.3-201ENST00000618841 406 ntBASIC-0.74□□□□□ -2.53
TFF3Q07654 SNORD115-24-201ENST00000363528 82 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.75□□□□□ -2.53
TFF3Q07654 AC130509.1-201ENST00000464158 433 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 HMGB1P28-201ENST00000507778 552 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.75□□□□□ -2.53
TFF3Q07654 AP001328.1-201ENST00000528550 176 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 AP003066.2-201ENST00000529375 555 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.75□□□□□ -2.53
TFF3Q07654 AC092325.1-201ENST00000566449 554 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.75□□□□□ -2.53
TFF3Q07654 AC005176.2-201ENST00000596933 147 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.75□□□□□ -2.53
TFF3Q07654 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
TFF3Q07654 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.76□□□□□ -2.53
TFF3Q07654 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.76□□□□□ -2.53
TFF3Q07654 AC113420.1-201ENST00000507903 571 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.76□□□□□ -2.53
TFF3Q07654 RNY1P9-201ENST00000532431 109 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 POLR2KP1-201ENST00000553226 168 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.76□□□□□ -2.53
TFF3Q07654 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.76□□□□□ -2.53
TFF3Q07654 HMGB1P33-201ENST00000563485 527 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 AC004987.4-201ENST00000603383 338 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 AC021851.1-201ENST00000608537 1082 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 AC006157.1-201ENST00000611750 366 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 AC104985.3-201ENST00000623479 597 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.76□□□□□ -2.53
TFF3Q07654 AC107982.1-201ENST00000507171 1300 ntBASIC-0.76□□□□□ -2.53
TFF3Q07654 RNU6-233P-201ENST00000410845 141 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 RNFT1P2-201ENST00000443064 757 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 SNORD57-201ENST00000448188 72 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.77□□□□□ -2.53
TFF3Q07654 MIR8076-201ENST00000611401 83 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 AC138627.2-201ENST00000624202 601 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 AC080188.3-201ENST00000624842 748 ntBASIC-0.77□□□□□ -2.53
TFF3Q07654 MTND4P5-201ENST00000435821 1374 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 SNORA9.1-201ENST00000362412 131 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 RNA5SP259-201ENST00000365541 109 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 RNU6-929P-201ENST00000384429 107 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 MIR196A2-201ENST00000385189 110 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
TFF3Q07654 AL109755.1-201ENST00000401791 649 ntBASIC-0.78□□□□□ -2.53
TFF3Q07654 SNORA81-201ENST00000408493 178 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms