Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
COL16A1Q07092 HMGN1P13-201ENST00000505795 138 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 RNU6-566P-201ENST00000516790 107 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 RNU6-1314P-201ENST00000517139 104 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.15□□□□□ -2.07
COL16A1Q07092 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.15□□□□□ -2.07
COL16A1Q07092 MIR4703-201ENST00000577728 79 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 MIR4742-201ENST00000581069 85 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 MIR151B-201ENST00000584249 96 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 MIR3672-201ENST00000584290 82 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 AL133215.3-201ENST00000609801 448 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 SNHG22-203ENST00000617833 660 ntBASIC2.15□□□□□ -2.07
COL16A1Q07092 ZNF209P-201ENST00000593450 2304 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 ZNF271P-202ENST00000465539 1970 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
COL16A1Q07092 Y_RNA.146-201ENST00000363549 102 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 Y_RNA.231-201ENST00000364358 102 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 Y_RNA.378-201ENST00000365652 113 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 RNU6-946P-201ENST00000383878 107 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 RNU6-629P-201ENST00000384061 103 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 Y_RNA.431-201ENST00000384086 102 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 MIR135A2-201ENST00000384854 100 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AL136372.1-201ENST00000403060 228 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.14□□□□□ -2.07
COL16A1Q07092 AC093106.2-201ENST00000428212 385 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.14□□□□□ -2.07
COL16A1Q07092 CKS1BP5-201ENST00000434172 273 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 HMGN2P20-201ENST00000437531 273 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 MTND1P18-201ENST00000448191 573 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.14□□□□□ -2.07
COL16A1Q07092 AL162395.1-201ENST00000457882 422 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 Y_RNA.632-201ENST00000459189 102 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 RPL7P43-201ENST00000478876 753 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AC087190.1-201ENST00000484462 480 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 MTCO3P9-201ENST00000506989 781 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 RBBP4P6-201ENST00000508098 202 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.14□□□□□ -2.07
COL16A1Q07092 RNA5SP503-201ENST00000517047 117 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.14□□□□□ -2.07
COL16A1Q07092 AP001804.3-201ENST00000525146 880 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AC008521.1-201ENST00000587471 187 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AL669831.4-202ENST00000590817 238 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AL121917.1-203ENST00000605534 577 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 RPL23AP88-201ENST00000605759 454 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 PART1_1.1-201ENST00000611761 217 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 DUSP12P1-201ENST00000612874 516 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 AC090574.1-201ENST00000623186 233 ntBASIC2.14□□□□□ -2.07
COL16A1Q07092 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL16A1Q07092 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL16A1Q07092 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL16A1Q07092 Y_RNA.36-201ENST00000362602 112 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 RNU1-22P-201ENST00000363334 158 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 SNORD113-7-201ENST00000363762 77 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 RNU4-65P-201ENST00000410473 140 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AC074085.1-201ENST00000413598 418 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 MTCO3P45-201ENST00000443036 613 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AC027575.1-201ENST00000481064 460 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 RNU6-56P-201ENST00000516986 93 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.13□□□□□ -2.07
COL16A1Q07092 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.13□□□□□ -2.07
COL16A1Q07092 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.13□□□□□ -2.07
COL16A1Q07092 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.13□□□□□ -2.07
COL16A1Q07092 MIR4474-201ENST00000579189 78 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 MIR3941-201ENST00000582572 103 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 XIAPP1-201ENST00000603162 600 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AC084781.2-201ENST00000615568 161 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 MIR6130-201ENST00000619419 109 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AL160413.1-201ENST00000622780 310 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 MTND4P27-201ENST00000450813 1354 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.13□□□□□ -2.07
COL16A1Q07092 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.13□□□□□ -2.07
COL16A1Q07092 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
COL16A1Q07092 Y_RNA.162-201ENST00000363683 102 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 Y_RNA.259-201ENST00000364619 101 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 RNU6-193P-201ENST00000410977 107 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 RNU6-387P-201ENST00000411331 105 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.13□□□□□ -2.07
COL16A1Q07092 RPL7L1P10-201ENST00000427790 463 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 CALM2P2-201ENST00000428512 440 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AL121871.1-201ENST00000443413 436 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AC020550.1-201ENST00000447385 163 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 snoU13.3-201ENST00000459441 104 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 Y_RNA.718-201ENST00000517110 102 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AP003072.1-201ENST00000531740 145 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.13□□□□□ -2.07
COL16A1Q07092 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.13□□□□□ -2.07
COL16A1Q07092 AC092807.2-201ENST00000609367 243 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 AC034102.8-201ENST00000615146 484 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 uc_338.34-201ENST00000617467 174 ntBASIC2.13□□□□□ -2.07
COL16A1Q07092 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.13□□□□□ -2.07
COL16A1Q07092 RNU6-254P-201ENST00000363377 107 ntBASIC2.12□□□□□ -2.07
COL16A1Q07092 Y_RNA.339-201ENST00000365325 102 ntBASIC2.12□□□□□ -2.07
COL16A1Q07092 HSPE1P1-201ENST00000421494 318 ntBASIC2.12□□□□□ -2.07
COL16A1Q07092 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL16A1Q07092 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.12□□□□□ -2.07
COL16A1Q07092 RPS15AP27-201ENST00000449183 343 ntBASIC2.12□□□□□ -2.07
COL16A1Q07092 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.12□□□□□ -2.07
COL16A1Q07092 Y_RNA.654-201ENST00000497848 106 ntBASIC2.12□□□□□ -2.07
COL16A1Q07092 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.12□□□□□ -2.07
COL16A1Q07092 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms