Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC002486.1-201ENST00000435098 391 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC007677.1-201ENST00000445757 515 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC006026.2-201ENST00000457376 180 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 HMGB1P35-201ENST00000503360 598 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 LRRC34P2-201ENST00000514850 553 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 SNORA25.17-201ENST00000517184 124 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 AGGF1P4-201ENST00000568249 801 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC002044.1-201ENST00000606707 158 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 AC241585.2-209ENST00000638217 143 ntBASIC1.64□□□□□ -2.15
HMGCS1Q01581 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HMGCS1Q01581 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 Y_RNA.51-201ENST00000362725 102 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU6-655P-201ENST00000362858 107 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU6-527P-201ENST00000363425 104 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 Y_RNA.296-201ENST00000364930 108 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU5A-6P-201ENST00000384136 116 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU6-1119P-201ENST00000384349 108 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU6-1274P-201ENST00000384557 107 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 MIR561-201ENST00000385216 97 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU6-1158P-201ENST00000391167 107 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 SNORD56-201ENST00000413522 71 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AL122001.1-201ENST00000457027 370 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 GMFBP1-201ENST00000467831 427 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC104564.1-201ENST00000493028 407 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC108078.1-201ENST00000508073 725 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC091133.4-201ENST00000511142 308 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC010493.1-201ENST00000513479 292 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 SNORA48.11-201ENST00000517015 89 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 RNU6-586P-201ENST00000517265 104 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC023050.3-201ENST00000541142 333 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 IMMP1LP2-201ENST00000552954 492 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC243960.4-201ENST00000600532 288 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 MIR8081-201ENST00000611533 95 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AL354950.2-201ENST00000617939 290 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AL159153.1-201ENST00000619688 317 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 AC090517.3-201ENST00000625170 141 ntBASIC1.63□□□□□ -2.15
HMGCS1Q01581 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGCS1Q01581 AP006437.1-201ENST00000641440 3685 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 Y_RNA.1-201ENST00000352915 104 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 snoU2_19.1-201ENST00000362361 80 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 RNU6-428P-201ENST00000362942 107 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 RNU6-996P-201ENST00000365438 107 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 MIR544A-201ENST00000384855 91 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 Y_RNA.582-201ENST00000391023 95 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 USP9YP14-201ENST00000430663 563 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 AL591043.1-201ENST00000432461 424 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 MTND2P22-201ENST00000444325 1033 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 RPL39P29-201ENST00000447779 157 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC073415.1-201ENST00000449240 153 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 FDX1P2-201ENST00000450769 375 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 SNRPFP3-201ENST00000457792 225 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 RNU7-63P-201ENST00000459054 62 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 snoU13.14-201ENST00000459372 104 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGCS1Q01581 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 HIF1AP1-201ENST00000553642 175 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 PIGPP4-201ENST00000584447 307 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC078795.2-201ENST00000602835 1252 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGCS1Q01581 AC008121.3-201ENST00000618726 433 ntBASIC1.62□□□□□ -2.15
HMGCS1Q01581 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMGCS1Q01581 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HMGCS1Q01581 RNU6-1210P-201ENST00000363775 107 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 RNU6-105P-201ENST00000363909 104 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 RNU6-944P-201ENST00000364023 107 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 Y_RNA.409-201ENST00000383990 98 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 RNU6-517P-201ENST00000384362 110 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 CBX3P9-201ENST00000402326 552 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 AL356432.1-201ENST00000405809 419 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 RNU2-48P-201ENST00000410694 191 ntBASIC1.61□□□□□ -2.15
HMGCS1Q01581 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms