Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.5□□□□□ -2.17
VSX2P58304 MTCO3P28-201ENST00000513351 515 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.5□□□□□ -2.17
VSX2P58304 MIR449C-201ENST00000516047 92 ntBASIC1.5□□□□□ -2.17
VSX2P58304 SNORD27.1-201ENST00000516319 72 ntBASIC1.5□□□□□ -2.17
VSX2P58304 Y_RNA.676-201ENST00000516393 96 ntBASIC1.5□□□□□ -2.17
VSX2P58304 RNU6-410P-201ENST00000517006 107 ntBASIC1.5□□□□□ -2.17
VSX2P58304 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.5□□□□□ -2.17
VSX2P58304 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
VSX2P58304 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
VSX2P58304 MIR3682-201ENST00000581338 84 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.5□□□□□ -2.17
VSX2P58304 VN1R80P-201ENST00000597126 338 ntBASIC1.5□□□□□ -2.17
VSX2P58304 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.5□□□□□ -2.17
VSX2P58304 AL078605.1-201ENST00000603529 500 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AL136363.2-201ENST00000604173 851 ntBASIC1.5□□□□□ -2.17
VSX2P58304 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
VSX2P58304 snoU13.31-201ENST00000607291 104 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AC136475.10-201ENST00000620253 385 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AC091931.1-201ENST00000623488 728 ntBASIC1.5□□□□□ -2.17
VSX2P58304 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
VSX2P58304 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
VSX2P58304 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
VSX2P58304 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VSX2P58304 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 RNU6-1285P-201ENST00000363480 105 ntBASIC1.49□□□□□ -2.17
VSX2P58304 RNU6-692P-201ENST00000384496 107 ntBASIC1.49□□□□□ -2.17
VSX2P58304 SNORA8-201ENST00000384574 139 ntBASIC1.49□□□□□ -2.17
VSX2P58304 RNY3P10-201ENST00000384764 102 ntBASIC1.49□□□□□ -2.17
VSX2P58304 SNORA12-201ENST00000391162 147 ntBASIC1.49□□□□□ -2.17
VSX2P58304 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.49□□□□□ -2.17
VSX2P58304 AC244636.1-201ENST00000421152 228 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AL591043.1-201ENST00000432461 424 ntBASIC1.49□□□□□ -2.17
VSX2P58304 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.49□□□□□ -2.17
VSX2P58304 MTCO2P6-201ENST00000463134 685 ntBASIC1.49□□□□□ -2.17
VSX2P58304 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 MTND3P7-201ENST00000474435 343 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AC093259.1-201ENST00000509755 300 ntBASIC1.49□□□□□ -2.17
VSX2P58304 MTCO3P7-201ENST00000510008 774 ntBASIC1.49□□□□□ -2.17
VSX2P58304 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
VSX2P58304 Y_RNA.717-201ENST00000517106 92 ntBASIC1.49□□□□□ -2.17
VSX2P58304 RN7SKP256-201ENST00000517201 314 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AP003072.2-201ENST00000527756 676 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 AC091135.1-201ENST00000585943 307 ntBASIC1.49□□□□□ -2.17
VSX2P58304 SEPT7P9-203ENST00000604116 343 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AL670379.2-201ENST00000604983 252 ntBASIC1.49□□□□□ -2.17
VSX2P58304 AC068944.2-201ENST00000610373 403 ntBASIC1.49□□□□□ -2.17
VSX2P58304 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.49□□□□□ -2.17
VSX2P58304 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.49□□□□□ -2.17
VSX2P58304 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.49□□□□□ -2.17
VSX2P58304 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
VSX2P58304 RNU4-15P-201ENST00000362613 141 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNU6-181P-201ENST00000363225 107 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNU6-105P-201ENST00000363909 104 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNU6-108P-201ENST00000365558 107 ntBASIC1.48□□□□□ -2.17
VSX2P58304 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
VSX2P58304 FGF7P8-201ENST00000402994 292 ntBASIC1.48□□□□□ -2.17
VSX2P58304 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNU4-62P-201ENST00000410125 130 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNA5SP501-201ENST00000410990 112 ntBASIC1.48□□□□□ -2.17
VSX2P58304 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.48□□□□□ -2.17
VSX2P58304 AL596276.1-201ENST00000434465 418 ntBASIC1.48□□□□□ -2.17
VSX2P58304 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.48□□□□□ -2.17
VSX2P58304 AC079781.2-201ENST00000446424 169 ntBASIC1.48□□□□□ -2.17
VSX2P58304 AC006026.2-201ENST00000457376 180 ntBASIC1.48□□□□□ -2.17
VSX2P58304 RNU7-182P-201ENST00000459009 62 ntBASIC1.48□□□□□ -2.17
VSX2P58304 AC027575.1-201ENST00000481064 460 ntBASIC1.48□□□□□ -2.17
VSX2P58304 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.48□□□□□ -2.17
VSX2P58304 RNU6-445P-201ENST00000516949 107 ntBASIC1.48□□□□□ -2.17
VSX2P58304 AC018630.3-201ENST00000542637 96 ntBASIC1.48□□□□□ -2.17
VSX2P58304 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.48□□□□□ -2.17
VSX2P58304 AL603755.1-201ENST00000619504 163 ntBASIC1.48□□□□□ -2.17
VSX2P58304 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
VSX2P58304 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.47□□□□□ -2.17
VSX2P58304 RNU6-1097P-201ENST00000363586 107 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNORD114-6-201ENST00000364393 72 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNORD14D-201ENST00000384390 87 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNORA40.19-201ENST00000390846 128 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNORD70.1-201ENST00000391007 85 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
VSX2P58304 BTF3L4P2-201ENST00000392798 346 ntBASIC1.47□□□□□ -2.17
VSX2P58304 RNU6-293P-201ENST00000411259 106 ntBASIC1.47□□□□□ -2.17
VSX2P58304 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.47□□□□□ -2.17
VSX2P58304 VN1R36P-201ENST00000414936 291 ntBASIC1.47□□□□□ -2.17
VSX2P58304 MTND1P18-201ENST00000448191 573 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNRPFP4-201ENST00000456366 242 ntBASIC1.47□□□□□ -2.17
VSX2P58304 RNA5SP269-201ENST00000459032 137 ntBASIC1.47□□□□□ -2.17
VSX2P58304 SNRPGP7-201ENST00000469016 106 ntBASIC1.47□□□□□ -2.17
VSX2P58304 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.47□□□□□ -2.17
VSX2P58304 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.47□□□□□ -2.17
VSX2P58304 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.47□□□□□ -2.17
VSX2P58304 AC096745.1-201ENST00000509945 370 ntBASIC1.47□□□□□ -2.17
VSX2P58304 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms