Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MTATP6P16-201ENST00000434543 526 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RPL36AP21-201ENST00000490372 323 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AC097473.1-201ENST00000508142 408 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.32□□□□□ -2.2
CLDN18P56856 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-685P-201ENST00000517088 95 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RPL21P5-201ENST00000554662 472 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.32□□□□□ -2.2
CLDN18P56856 SUB1P4-201ENST00000566062 339 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AC109446.1-201ENST00000566172 220 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 AC110760.3-201ENST00000598794 467 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 RNU6-6P-201ENST00000606623 107 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 MIR8063-201ENST00000621930 81 ntBASIC1.32□□□□□ -2.2
CLDN18P56856 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CLDN18P56856 RNU6-1287P-201ENST00000362914 107 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNU6-105P-201ENST00000363909 104 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 SNORD32B-201ENST00000364460 84 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNU6-1060P-201ENST00000384664 107 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNU1-78P-201ENST00000391248 165 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNU2-7P-201ENST00000410794 178 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNU6-607P-201ENST00000411283 108 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 OR6C66P-201ENST00000414917 930 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.31□□□□□ -2.2
CLDN18P56856 AL590135.1-201ENST00000422215 156 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.31□□□□□ -2.2
CLDN18P56856 AC019205.3-201ENST00000424573 156 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLDN18P56856 SNRPEP8-201ENST00000442866 260 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 AC016700.2-201ENST00000446011 156 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 GAPDHP17-201ENST00000449858 1001 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 ZNF114P1-201ENST00000453500 292 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNU1-131P-201ENST00000458943 161 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 RNA5SP269-201ENST00000459032 137 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 AC087477.1-201ENST00000465747 340 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 AC015911.1-201ENST00000495111 156 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN18P56856 TPT1P8-201ENST00000510120 555 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 SCARNA24.1-201ENST00000516465 137 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN18P56856 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.31□□□□□ -2.2
CLDN18P56856 MIR3136-201ENST00000583498 78 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 AC107304.1-201ENST00000604229 296 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 snoU13.31-201ENST00000607291 104 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CLDN18P56856 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 Z69720.2-201ENST00000624755 279 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 WWP1P1-201ENST00000466609 2769 ntBASIC1.31□□□□□ -2.2
CLDN18P56856 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLDN18P56856 RNU6-1285P-201ENST00000363480 105 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 Y_RNA.324-201ENST00000365165 102 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 Y_RNA.332-201ENST00000365271 113 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 SNORD115-7-201ENST00000365306 82 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 RNU6-142P-201ENST00000384019 107 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 AC123900.1-201ENST00000420390 96 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN18P56856 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN18P56856 UBE2D3P4-201ENST00000441973 436 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDN18P56856 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 AC104136.1-201ENST00000512969 394 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 RNU6-1178P-201ENST00000516674 107 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 RNU6-1220P-201ENST00000517126 108 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 SUMO2P18-201ENST00000518873 252 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDN18P56856 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDN18P56856 AL161670.1-201ENST00000554348 137 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 MIR4498-201ENST00000577599 66 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 AC023043.2-201ENST00000589678 1026 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLDN18P56856 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.3□□□□□ -2.2
CLDN18P56856 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLDN18P56856 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 RNU6-500P-201ENST00000362349 107 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 RNU6-112P-201ENST00000363599 104 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 RNU6-271P-201ENST00000363858 105 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 RNU2-3P-201ENST00000410144 191 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 RNU6-584P-201ENST00000410350 95 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN18P56856 AC139712.2-201ENST00000424302 339 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 Z82205.1-201ENST00000428456 297 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AC244670.1-201ENST00000436879 112 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AC243964.1-201ENST00000441814 261 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 MTCO1P44-201ENST00000441935 243 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 MTND2P4-201ENST00000445034 1004 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AC087441.2-201ENST00000529141 262 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN18P56856 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN18P56856 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN18P56856 SUB1P3-201ENST00000564581 315 ntBASIC1.29□□□□□ -2.2
CLDN18P56856 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.29□□□□□ -2.2
CLDN18P56856 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms