Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL670379.2-201ENST00000604983 252 ntBASIC2.36□□□□□ -2.03
CDH13P55290 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH13P55290 Y_RNA.414-201ENST00000384011 101 ntBASIC2.35□□□□□ -2.03
CDH13P55290 MIR561-201ENST00000385216 97 ntBASIC2.35□□□□□ -2.03
CDH13P55290 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH13P55290 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
CDH13P55290 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH13P55290 U8.21-201ENST00000459536 136 ntBASIC2.35□□□□□ -2.03
CDH13P55290 AC114801.2-201ENST00000503825 781 ntBASIC2.35□□□□□ -2.03
CDH13P55290 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH13P55290 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH13P55290 RNU5F-2P-201ENST00000516066 82 ntBASIC2.35□□□□□ -2.03
CDH13P55290 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
CDH13P55290 AC026371.1-201ENST00000551867 419 ntBASIC2.35□□□□□ -2.03
CDH13P55290 TRAV32-201ENST00000553993 340 ntBASIC2.35□□□□□ -2.03
CDH13P55290 MIR4319-201ENST00000577285 85 ntBASIC2.35□□□□□ -2.03
CDH13P55290 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH13P55290 AP000907.4-201ENST00000604143 237 ntBASIC2.35□□□□□ -2.03
CDH13P55290 AC018889.1-201ENST00000605372 397 ntBASIC2.35□□□□□ -2.03
CDH13P55290 CTHRC1P1-201ENST00000605383 469 ntBASIC2.35□□□□□ -2.03
CDH13P55290 AC006504.8-201ENST00000621046 635 ntBASIC2.35□□□□□ -2.03
CDH13P55290 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CDH13P55290 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH13P55290 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH13P55290 AC092268.1-201ENST00000342691 405 ntBASIC2.34□□□□□ -2.03
CDH13P55290 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
CDH13P55290 MIR196B-201ENST00000384852 84 ntBASIC2.34□□□□□ -2.03
CDH13P55290 SNORA26.3-201ENST00000391119 136 ntBASIC2.34□□□□□ -2.03
CDH13P55290 VN1R36P-201ENST00000414936 291 ntBASIC2.34□□□□□ -2.03
CDH13P55290 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH13P55290 AC244670.1-201ENST00000436879 112 ntBASIC2.34□□□□□ -2.03
CDH13P55290 AL353752.1-201ENST00000454946 260 ntBASIC2.34□□□□□ -2.03
CDH13P55290 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH13P55290 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH13P55290 HMGB1P35-201ENST00000503360 598 ntBASIC2.34□□□□□ -2.03
CDH13P55290 RNU6-612P-201ENST00000516909 102 ntBASIC2.34□□□□□ -2.03
CDH13P55290 RNU6-1314P-201ENST00000517139 104 ntBASIC2.34□□□□□ -2.03
CDH13P55290 AC104576.1-201ENST00000524225 88 ntBASIC2.34□□□□□ -2.03
CDH13P55290 AC087241.2-201ENST00000535801 324 ntBASIC2.34□□□□□ -2.03
CDH13P55290 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
CDH13P55290 AC146944.4-201ENST00000602697 718 ntBASIC2.34□□□□□ -2.03
CDH13P55290 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH13P55290 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
CDH13P55290 AC090617.10-201ENST00000624308 134 ntBASIC2.34□□□□□ -2.03
CDH13P55290 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
CDH13P55290 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDH13P55290 AC062016.1-201ENST00000355719 319 ntBASIC2.33□□□□□ -2.04
CDH13P55290 RNU6-227P-201ENST00000362865 103 ntBASIC2.33□□□□□ -2.04
CDH13P55290 U3.13-201ENST00000364804 214 ntBASIC2.33□□□□□ -2.04
CDH13P55290 RNU6-142P-201ENST00000384019 107 ntBASIC2.33□□□□□ -2.04
CDH13P55290 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
CDH13P55290 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CDH13P55290 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH13P55290 AL513185.2-201ENST00000425543 193 ntBASIC2.33□□□□□ -2.04
CDH13P55290 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH13P55290 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH13P55290 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
CDH13P55290 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH13P55290 RPL9P9-202ENST00000466501 579 ntBASIC2.33□□□□□ -2.04
CDH13P55290 MTCO1P29-201ENST00000496868 288 ntBASIC2.33□□□□□ -2.04
CDH13P55290 AC016632.1-201ENST00000503994 196 ntBASIC2.33□□□□□ -2.04
CDH13P55290 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH13P55290 AC107222.1-201ENST00000510899 637 ntBASIC2.33□□□□□ -2.04
CDH13P55290 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH13P55290 AC025465.4-201ENST00000513422 638 ntBASIC2.33□□□□□ -2.04
CDH13P55290 RNU6-256P-201ENST00000516747 97 ntBASIC2.33□□□□□ -2.04
CDH13P55290 RNU1-104P-201ENST00000517280 175 ntBASIC2.33□□□□□ -2.04
CDH13P55290 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH13P55290 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH13P55290 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
CDH13P55290 AL138726.1-201ENST00000614873 333 ntBASIC2.33□□□□□ -2.04
CDH13P55290 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH13P55290 Z82209.1-201ENST00000422141 2135 ntBASIC2.33□□□□□ -2.04
CDH13P55290 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CDH13P55290 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH13P55290 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CDH13P55290 Y_RNA.135-201ENST00000363439 95 ntBASIC2.32□□□□□ -2.04
CDH13P55290 SNORA5B-201ENST00000363786 132 ntBASIC2.32□□□□□ -2.04
CDH13P55290 Y_RNA.212-201ENST00000364177 102 ntBASIC2.32□□□□□ -2.04
CDH13P55290 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH13P55290 RNU6-1032P-201ENST00000384100 107 ntBASIC2.32□□□□□ -2.04
CDH13P55290 MIR23A-201ENST00000385245 73 ntBASIC2.32□□□□□ -2.04
CDH13P55290 BTF3L4P2-201ENST00000392798 346 ntBASIC2.32□□□□□ -2.04
CDH13P55290 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH13P55290 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AL030996.1-201ENST00000411430 235 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AC007064.1-201ENST00000412238 351 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH13P55290 MTCO3P18-201ENST00000440206 761 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH13P55290 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH13P55290 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH13P55290 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH13P55290 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
CDH13P55290 RNA5SP356-201ENST00000515972 94 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH13P55290 AF235103.2-201ENST00000525753 346 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AC018630.3-201ENST00000542637 96 ntBASIC2.32□□□□□ -2.04
CDH13P55290 AC016256.1-201ENST00000547971 354 ntBASIC2.32□□□□□ -2.04
CDH13P55290 HSPE1P4-201ENST00000550617 308 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms