Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.22□□□□□ -1.89
CLK3P49761 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLK3P49761 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.22□□□□□ -1.89
CLK3P49761 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CLK3P49761 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLK3P49761 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLK3P49761 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLK3P49761 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CLK3P49761 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLK3P49761 RNU6-1266P-201ENST00000362794 105 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RNU6-774P-201ENST00000363238 107 ntBASIC3.21□□□□□ -1.9
CLK3P49761 SNORD14B-201ENST00000364533 90 ntBASIC3.21□□□□□ -1.9
CLK3P49761 Y_RNA.277-201ENST00000364754 102 ntBASIC3.21□□□□□ -1.9
CLK3P49761 PCNPP3-201ENST00000393579 471 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RPL21P75-201ENST00000396599 483 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RPL21P28-201ENST00000401418 483 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.21□□□□□ -1.9
CLK3P49761 AL590556.1-201ENST00000423231 483 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RPL23AP82-202ENST00000427528 469 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK3P49761 GOT2P5-201ENST00000433995 546 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RPL21P39-201ENST00000463605 483 ntBASIC3.21□□□□□ -1.9
CLK3P49761 CENPBD1P1-201ENST00000464061 469 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC132942.1-201ENST00000486753 483 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RPL21P13-201ENST00000488305 481 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC093591.1-201ENST00000491435 481 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RPL21P16-201ENST00000495531 483 ntBASIC3.21□□□□□ -1.9
CLK3P49761 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
CLK3P49761 RNU6-612P-201ENST00000516909 102 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AP002770.2-201ENST00000543613 532 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC103996.1-201ENST00000555468 102 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC136932.1-201ENST00000574771 208 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK3P49761 AC019176.2-201ENST00000611579 315 ntBASIC3.21□□□□□ -1.9
CLK3P49761 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK3P49761 AC039056.2-201ENST00000622261 511 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC099506.2-201ENST00000623074 221 ntBASIC3.21□□□□□ -1.9
CLK3P49761 AC127459.3-201ENST00000624328 466 ntBASIC3.21□□□□□ -1.9
CLK3P49761 U6.92-201ENST00000636464 89 ntBASIC3.21□□□□□ -1.9
CLK3P49761 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLK3P49761 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.9
CLK3P49761 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLK3P49761 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
CLK3P49761 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLK3P49761 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
CLK3P49761 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
CLK3P49761 RNA5SP50-201ENST00000363731 107 ntBASIC3.2□□□□□ -1.9
CLK3P49761 Y_RNA.269-201ENST00000364685 89 ntBASIC3.2□□□□□ -1.9
CLK3P49761 Y_RNA.358-201ENST00000365491 99 ntBASIC3.2□□□□□ -1.9
CLK3P49761 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK3P49761 RNU6-378P-201ENST00000384324 107 ntBASIC3.2□□□□□ -1.9
CLK3P49761 RNY3P4-201ENST00000384428 101 ntBASIC3.2□□□□□ -1.9
CLK3P49761 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLK3P49761 SNORA12.2-201ENST00000391040 156 ntBASIC3.2□□□□□ -1.9
CLK3P49761 MTCO2P33-201ENST00000402100 465 ntBASIC3.2□□□□□ -1.9
CLK3P49761 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
CLK3P49761 Y_RNA.623-201ENST00000411128 95 ntBASIC3.2□□□□□ -1.9
CLK3P49761 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
CLK3P49761 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
CLK3P49761 AL627311.1-201ENST00000431514 115 ntBASIC3.2□□□□□ -1.9
CLK3P49761 AL445305.1-201ENST00000432577 575 ntBASIC3.2□□□□□ -1.9
CLK3P49761 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLK3P49761 AC013470.1-201ENST00000453438 462 ntBASIC3.2□□□□□ -1.9
CLK3P49761 Y_RNA.644-201ENST00000459006 113 ntBASIC3.2□□□□□ -1.9
CLK3P49761 SNORA84-201ENST00000459229 133 ntBASIC3.2□□□□□ -1.9
CLK3P49761 Y_RNA.674-201ENST00000516362 113 ntBASIC3.2□□□□□ -1.9
CLK3P49761 RNU6-1212P-201ENST00000517023 104 ntBASIC3.2□□□□□ -1.9
CLK3P49761 AC007458.1-201ENST00000542812 373 ntBASIC3.2□□□□□ -1.9
CLK3P49761 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
CLK3P49761 AC008121.1-201ENST00000603244 268 ntBASIC3.2□□□□□ -1.9
CLK3P49761 AC008739.3-201ENST00000603262 127 ntBASIC3.2□□□□□ -1.9
CLK3P49761 SRGNP1-201ENST00000603392 451 ntBASIC3.2□□□□□ -1.9
CLK3P49761 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.2□□□□□ -1.9
CLK3P49761 AC073308.1-201ENST00000623696 305 ntBASIC3.2□□□□□ -1.9
CLK3P49761 AC012442.3-202ENST00000636742 206 ntBASIC3.2□□□□□ -1.9
CLK3P49761 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLK3P49761 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLK3P49761 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLK3P49761 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLK3P49761 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLK3P49761 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLK3P49761 AC110774.1-201ENST00000623567 2018 ntBASIC3.19□□□□□ -1.9
CLK3P49761 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
CLK3P49761 RNU6-545P-201ENST00000362681 104 ntBASIC3.19□□□□□ -1.9
CLK3P49761 Y_RNA.83-201ENST00000363005 113 ntBASIC3.19□□□□□ -1.9
CLK3P49761 RNU6-270P-201ENST00000364131 105 ntBASIC3.19□□□□□ -1.9
CLK3P49761 Y_RNA.581-201ENST00000391017 97 ntBASIC3.19□□□□□ -1.9
CLK3P49761 MIR1298-201ENST00000408783 112 ntBASIC3.19□□□□□ -1.9
CLK3P49761 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
CLK3P49761 Y_RNA.793-201ENST00000411222 111 ntBASIC3.19□□□□□ -1.9
CLK3P49761 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK3P49761 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK3P49761 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
CLK3P49761 TOMM20P4-201ENST00000427861 435 ntBASIC3.19□□□□□ -1.9
CLK3P49761 MTCO3P29-201ENST00000432119 779 ntBASIC3.19□□□□□ -1.9
CLK3P49761 AK3P2-201ENST00000507976 429 ntBASIC3.19□□□□□ -1.9
CLK3P49761 FCF1P8-201ENST00000510322 597 ntBASIC3.19□□□□□ -1.9
CLK3P49761 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
CLK3P49761 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
CLK3P49761 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms