Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL691449.1-201ENST00000426570 421 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 RPS27P1-201ENST00000450552 247 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.4□□□□□ -1.54
PRIM1P49642 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.4□□□□□ -1.54
PRIM1P49642 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.4□□□□□ -1.54
PRIM1P49642 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.4□□□□□ -1.54
PRIM1P49642 AC025946.2-201ENST00000603398 234 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 AL162713.1-201ENST00000604480 262 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.4□□□□□ -1.54
PRIM1P49642 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.4□□□□□ -1.55
PRIM1P49642 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PRIM1P49642 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.4□□□□□ -1.55
PRIM1P49642 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PRIM1P49642 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.4□□□□□ -1.55
PRIM1P49642 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRIM1P49642 SNORA63.4-201ENST00000362763 126 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 RNU6-799P-201ENST00000363567 107 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 RNU6-728P-201ENST00000365375 104 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 SNORA9-201ENST00000384215 133 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 Y_RNA.456-201ENST00000384232 111 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 SNORA26.5-201ENST00000391215 123 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PRIM1P49642 MIR1911-201ENST00000410783 80 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.39□□□□□ -1.55
PRIM1P49642 RPS12P23-201ENST00000419579 400 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 SNORD108-201ENST00000459332 71 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 RPL23AP70-201ENST00000483361 460 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 RNA5SP76-201ENST00000516277 87 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 MTND6P33-201ENST00000571794 183 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 AL391813.1-201ENST00000603098 260 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 AC007179.3-201ENST00000604976 235 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PRIM1P49642 MIR6715B-201ENST00000637172 77 ntBASIC5.39□□□□□ -1.55
PRIM1P49642 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRIM1P49642 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRIM1P49642 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRIM1P49642 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRIM1P49642 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRIM1P49642 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PRIM1P49642 Y_RNA.368-201ENST00000365547 113 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 MIR15B-201ENST00000385045 98 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 MIR325-201ENST00000385260 98 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.38□□□□□ -1.55
PRIM1P49642 AC006011.1-201ENST00000442758 349 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.38□□□□□ -1.55
PRIM1P49642 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.38□□□□□ -1.55
PRIM1P49642 AC100770.1-201ENST00000532310 322 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.38□□□□□ -1.55
PRIM1P49642 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.38□□□□□ -1.55
PRIM1P49642 AC090897.2-201ENST00000581715 130 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.38□□□□□ -1.55
PRIM1P49642 AL022322.2-201ENST00000624072 20397 ntBASIC5.38□□□□□ -1.55
PRIM1P49642 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PRIM1P49642 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRIM1P49642 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.38□□□□□ -1.55
PRIM1P49642 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.37□□□□□ -1.55
PRIM1P49642 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRIM1P49642 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRIM1P49642 Y_RNA.24-201ENST00000362508 103 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 MIR30B-201ENST00000384850 88 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 U3.26-201ENST00000391236 204 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 AC099548.1-201ENST00000421443 426 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 AL356535.1-201ENST00000440335 398 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.37□□□□□ -1.55
PRIM1P49642 RNU6-107P-201ENST00000516643 102 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 RNU2-56P-201ENST00000516826 190 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.37□□□□□ -1.55
PRIM1P49642 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.37□□□□□ -1.55
PRIM1P49642 Y_RNA.757-201ENST00000578934 114 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 MIR3923-201ENST00000579521 83 ntBASIC5.37□□□□□ -1.55
PRIM1P49642 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.37□□□□□ -1.55
PRIM1P49642 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRIM1P49642 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRIM1P49642 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRIM1P49642 AL592182.3-201ENST00000642132 3304 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.36□□□□□ -1.55
PRIM1P49642 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRIM1P49642 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRIM1P49642 AL161912.2-201ENST00000565707 3007 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
PRIM1P49642 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.36□□□□□ -1.55
PRIM1P49642 RNU6-1205P-201ENST00000363625 106 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 SNORA7.2-201ENST00000364446 145 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 Y_RNA.393-201ENST00000383936 102 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 RNY3P5-201ENST00000384127 102 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 Y_RNA.521-201ENST00000384560 114 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 SNORA75.5-201ENST00000391291 81 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 MIR208B-201ENST00000401172 77 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 AL031003.1-201ENST00000404229 172 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 CYCSP48-201ENST00000417124 323 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 TOMM22P2-201ENST00000430735 237 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 AL714022.1-201ENST00000439897 151 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 AC092991.1-201ENST00000477176 376 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.36□□□□□ -1.55
PRIM1P49642 RNU6-344P-201ENST00000516635 111 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 MIR3613-201ENST00000579844 87 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 AC006254.2-201ENST00000603259 279 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 AC012314.7-201ENST00000619693 93 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 U6.95-201ENST00000636931 70 ntBASIC5.36□□□□□ -1.55
PRIM1P49642 AC009093.8-201ENST00000641769 292 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms