Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC091135.1-201ENST00000585943 307 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AC090582.1-201ENST00000636321 199 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 U6.114-201ENST00000636407 96 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AL390237.1-201ENST00000404226 1415 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CX3CR1P49238 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-37P-201ENST00000362692 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 Y_RNA.77-201ENST00000362962 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-527P-201ENST00000363425 104 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-11P-201ENST00000364234 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 Y_RNA.324-201ENST00000365165 102 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-25P-201ENST00000383873 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-1-201ENST00000383898 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-48P-201ENST00000384161 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-36P-201ENST00000384172 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-4P-201ENST00000384205 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 SNORA70B-201ENST00000384210 135 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-5P-201ENST00000384238 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-3P-201ENST00000384314 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-16P-201ENST00000384385 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-15P-201ENST00000384534 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-2-201ENST00000384627 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-29P-201ENST00000384637 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-9-201ENST00000384776 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-33P-201ENST00000384793 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 SNORD70.1-201ENST00000391007 85 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-903P-201ENST00000391270 109 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 CDK8P2-201ENST00000415020 547 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 MTATP6P18-201ENST00000417994 673 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.54□□□□□ -2.16
CX3CR1P49238 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.54□□□□□ -2.16
CX3CR1P49238 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.54□□□□□ -2.16
CX3CR1P49238 MTND2P33-201ENST00000506452 1031 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.54□□□□□ -2.16
CX3CR1P49238 AC074344.1-201ENST00000512823 224 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 AC104136.1-201ENST00000512969 394 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-991P-201ENST00000516168 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 SNORA25.17-201ENST00000517184 124 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 AL391840.1-201ENST00000571144 367 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.54□□□□□ -2.16
CX3CR1P49238 CYP2C61P-201ENST00000604072 290 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 AC008945.2-201ENST00000606056 604 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 RNU6-6P-201ENST00000606623 107 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 AP001596.2-201ENST00000608410 312 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 AC104073.3-201ENST00000610942 955 ntBASIC1.54□□□□□ -2.16
CX3CR1P49238 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CX3CR1P49238 RNU6-428P-201ENST00000362942 107 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 SNORD116-1-201ENST00000384335 95 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 MIR583-201ENST00000384846 75 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 MIR1294-201ENST00000408503 142 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 RNU4-26P-201ENST00000410270 107 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 POLHP1-201ENST00000411806 470 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.53□□□□□ -2.16
CX3CR1P49238 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 VN1R36P-201ENST00000414936 291 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 MTCYBP8-201ENST00000422855 651 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 CBX3P6-201ENST00000430257 527 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.53□□□□□ -2.16
CX3CR1P49238 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.53□□□□□ -2.16
CX3CR1P49238 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.53□□□□□ -2.16
CX3CR1P49238 AC098826.2-201ENST00000452011 651 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 AC087884.1-201ENST00000469738 328 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 CCDC34P1-201ENST00000507441 517 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 MTCO3P7-201ENST00000510008 774 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.53□□□□□ -2.16
CX3CR1P49238 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CX3CR1P49238 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.53□□□□□ -2.16
CX3CR1P49238 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.53□□□□□ -2.16
CX3CR1P49238 AC109347.2-201ENST00000610220 349 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 AC072046.2-201ENST00000618366 268 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 U4.7-201ENST00000638126 106 ntBASIC1.53□□□□□ -2.16
CX3CR1P49238 RNU6-552P-201ENST00000362869 119 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 Y_RNA.99-201ENST00000363138 105 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 RNU6-1158P-201ENST00000391167 107 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 RNU4-46P-201ENST00000410818 138 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AC009310.1-201ENST00000414414 451 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AL590556.1-201ENST00000423231 483 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AL645568.3-201ENST00000433683 316 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.52□□□□□ -2.17
CX3CR1P49238 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.52□□□□□ -2.17
CX3CR1P49238 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.52□□□□□ -2.17
CX3CR1P49238 SCARNA18-201ENST00000459004 134 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.52□□□□□ -2.17
CX3CR1P49238 AP000873.5-201ENST00000533906 236 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.52□□□□□ -2.17
CX3CR1P49238 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.52□□□□□ -2.17
CX3CR1P49238 MTCO3P23-201ENST00000561363 289 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
CX3CR1P49238 MTND1P15-201ENST00000579262 949 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 RN7SKP299-201ENST00000606679 301 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AC002044.1-201ENST00000606707 158 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CX3CR1P49238 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.52□□□□□ -2.17
CX3CR1P49238 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms