Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RNU6-234P-201ENST00000365229 104 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 U8.13-201ENST00000390842 128 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 RNU6-903P-201ENST00000391270 109 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC068050.1-201ENST00000394891 380 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 RNU2-32P-201ENST00000411193 191 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 SRIP3-201ENST00000413200 219 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 USP9YP18-201ENST00000425912 695 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AL591043.1-201ENST00000432461 424 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 HMGN2P3-201ENST00000433603 273 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 HMGN2P5-201ENST00000436882 273 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC243964.1-201ENST00000441814 261 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 MTCO1P19-201ENST00000443487 500 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 PRPS1P1-201ENST00000445305 876 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 PPP1R2P5-201ENST00000457256 603 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 RNU6-956P-201ENST00000458868 103 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 SCARNA18-201ENST00000459004 134 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC117532.1-201ENST00000514638 323 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 SNORA25.17-201ENST00000517184 124 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 AL356057.1-201ENST00000533798 831 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AP000873.5-201ENST00000533906 236 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC023050.3-201ENST00000541142 333 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 GNAI2P1-201ENST00000541815 315 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC018630.3-201ENST00000542637 96 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 MTCO3P23-201ENST00000561363 289 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AGGF1P4-201ENST00000568249 801 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 MTATP6P3-201ENST00000581686 676 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC110760.3-201ENST00000598794 467 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC068790.2-201ENST00000602601 557 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 RMST_6.1-201ENST00000611980 203 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC091834.1-201ENST00000614543 472 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AL132822.1-201ENST00000617063 513 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 AL356292.1-201ENST00000283110 373 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 RNU4-42P-201ENST00000364738 142 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 RNU6-434P-201ENST00000384376 107 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 SNORD14D-201ENST00000384390 87 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 RNU2-29P-201ENST00000410423 189 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 POLHP1-201ENST00000411806 470 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 AL356010.1-201ENST00000456364 102 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 GMFBP1-201ENST00000467831 427 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC105417.1-201ENST00000514691 285 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 RNU5F-2P-201ENST00000516066 82 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AK6P1-201ENST00000540219 478 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC091135.1-201ENST00000585943 307 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AL391646.1-201ENST00000603860 190 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC002044.1-201ENST00000606707 158 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AP001596.2-201ENST00000608410 312 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.53□□□□□ -2.16
CSNK1A1P48729 MIR6845-201ENST00000613182 61 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC063943.3-201ENST00000615562 356 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 AC009509.4-201ENST00000619202 509 ntBASIC1.53□□□□□ -2.16
CSNK1A1P48729 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CSNK1A1P48729 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CSNK1A1P48729 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CSNK1A1P48729 RNU6-428P-201ENST00000362942 107 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 RNU6-1285P-201ENST00000363480 105 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 RNU6-546P-201ENST00000383991 107 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 RNU6-1222P-201ENST00000384615 107 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 Y_RNA.553-201ENST00000384670 102 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 MIR29B2-201ENST00000385055 81 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC009310.1-201ENST00000414414 451 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 MTATP6P17-201ENST00000431030 672 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 snoU13.15-201ENST00000459407 104 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 snoU13.26-201ENST00000459452 105 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC079382.1-201ENST00000493346 557 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 RNU6-377P-201ENST00000515965 102 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CSNK1A1P48729 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC022616.8-201ENST00000533569 253 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.52□□□□□ -2.17
CSNK1A1P48729 AC104581.2-201ENST00000572227 430 ntBASIC1.52□□□□□ -2.17
CSNK1A1P48729 MIR5583-1-201ENST00000580941 59 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms