Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.75□□□□□ -1.97
SOX2P48431 SNORA40.14-201ENST00000516543 86 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RNA5SP380-201ENST00000517190 98 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC091144.1-201ENST00000519573 138 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.75□□□□□ -1.97
SOX2P48431 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.75□□□□□ -1.97
SOX2P48431 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.75□□□□□ -1.97
SOX2P48431 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 AC006600.1-201ENST00000572529 153 ntBASIC2.75□□□□□ -1.97
SOX2P48431 MIR3922-201ENST00000585192 84 ntBASIC2.75□□□□□ -1.97
SOX2P48431 VN1R91P-201ENST00000594377 169 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC012493.2-201ENST00000595083 291 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC104695.3-201ENST00000604052 296 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AL359198.2-201ENST00000611836 194 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AL132822.1-201ENST00000617063 513 ntBASIC2.75□□□□□ -1.97
SOX2P48431 CR392039.5-201ENST00000623201 510 ntBASIC2.75□□□□□ -1.97
SOX2P48431 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 AP000560.1-201ENST00000624150 1937 ntBASIC2.74□□□□□ -1.97
SOX2P48431 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX2P48431 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX2P48431 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.74□□□□□ -1.97
SOX2P48431 SNORD114-19-201ENST00000363072 75 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RNU6-1285P-201ENST00000363480 105 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RNA5SP139-201ENST00000364340 117 ntBASIC2.74□□□□□ -1.97
SOX2P48431 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX2P48431 Y_RNA.455-201ENST00000384230 98 ntBASIC2.74□□□□□ -1.97
SOX2P48431 MIR628-201ENST00000385229 95 ntBASIC2.74□□□□□ -1.97
SOX2P48431 MIR23A-201ENST00000385245 73 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RNU6ATAC-201ENST00000408749 126 ntBASIC2.74□□□□□ -1.97
SOX2P48431 SNORA11-201ENST00000408789 128 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RNU6-101P-201ENST00000410323 104 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RN7SKP202-201ENST00000410439 330 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RPS29P4-201ENST00000414733 161 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.74□□□□□ -1.97
SOX2P48431 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC244505.4-201ENST00000434905 287 ntBASIC2.74□□□□□ -1.97
SOX2P48431 Z82188.1-201ENST00000436709 154 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.74□□□□□ -1.97
SOX2P48431 AC009969.1-201ENST00000438726 172 ntBASIC2.74□□□□□ -1.97
SOX2P48431 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.74□□□□□ -1.97
SOX2P48431 RPS12P18-201ENST00000442381 270 ntBASIC2.74□□□□□ -1.97
SOX2P48431 SSXP5-201ENST00000443473 287 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AL358232.1-201ENST00000448030 501 ntBASIC2.74□□□□□ -1.97
SOX2P48431 CHEK2P4-201ENST00000450340 246 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AP001324.2-201ENST00000461163 319 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC087477.1-201ENST00000465747 340 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.74□□□□□ -1.97
SOX2P48431 RNU6-56P-201ENST00000516986 93 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RNU1-45P-201ENST00000517191 141 ntBASIC2.74□□□□□ -1.97
SOX2P48431 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.74□□□□□ -1.97
SOX2P48431 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.74□□□□□ -1.97
SOX2P48431 AC021231.3-201ENST00000558497 370 ntBASIC2.74□□□□□ -1.97
SOX2P48431 MIR5571-201ENST00000577998 113 ntBASIC2.74□□□□□ -1.97
SOX2P48431 MIR2682-201ENST00000580305 110 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.74□□□□□ -1.97
SOX2P48431 AC016727.2-201ENST00000603988 621 ntBASIC2.74□□□□□ -1.97
SOX2P48431 uc_338.14-201ENST00000613162 166 ntBASIC2.74□□□□□ -1.97
SOX2P48431 U2.1-201ENST00000618978 145 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC034229.5-201ENST00000624258 185 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AC138305.3-201ENST00000624988 240 ntBASIC2.74□□□□□ -1.97
SOX2P48431 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.74□□□□□ -1.97
SOX2P48431 AC110079.1-202ENST00000635213 138 ntBASIC2.74□□□□□ -1.97
SOX2P48431 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX2P48431 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SOX2P48431 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.74□□□□□ -1.97
SOX2P48431 AC092435.3-201ENST00000565538 3654 ntBASIC2.74□□□□□ -1.97
SOX2P48431 Z83843.1-201ENST00000604070 3685 ntBASIC2.74□□□□□ -1.97
SOX2P48431 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SOX2P48431 ZNF72P-201ENST00000425869 1908 ntBASIC2.74□□□□□ -1.97
SOX2P48431 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
SOX2P48431 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SOX2P48431 RNU6-212P-201ENST00000362642 104 ntBASIC2.73□□□□□ -1.97
SOX2P48431 RNU6-1010P-201ENST00000362757 107 ntBASIC2.73□□□□□ -1.97
SOX2P48431 SNORD115-32-201ENST00000364079 82 ntBASIC2.73□□□□□ -1.97
SOX2P48431 U3.13-201ENST00000364804 214 ntBASIC2.73□□□□□ -1.97
SOX2P48431 SNORD14.1-201ENST00000365609 90 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AL356057.3-201ENST00000402607 340 ntBASIC2.73□□□□□ -1.97
SOX2P48431 Y_RNA.592-201ENST00000410274 109 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.73□□□□□ -1.97
SOX2P48431 AC009414.1-201ENST00000427200 443 ntBASIC2.73□□□□□ -1.97
SOX2P48431 HMGN2P31-201ENST00000432430 273 ntBASIC2.73□□□□□ -1.97
SOX2P48431 OR2AQ1P-201ENST00000451972 200 ntBASIC2.73□□□□□ -1.97
SOX2P48431 RNU7-87P-201ENST00000459343 62 ntBASIC2.73□□□□□ -1.97
SOX2P48431 TOMM22P6-201ENST00000465035 409 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AF186996.7-201ENST00000492781 209 ntBASIC2.73□□□□□ -1.97
SOX2P48431 RNU6-1046P-201ENST00000516538 107 ntBASIC2.73□□□□□ -1.97
SOX2P48431 RN7SKP272-201ENST00000516988 232 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.73□□□□□ -1.97
SOX2P48431 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.73□□□□□ -1.97
SOX2P48431 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.73□□□□□ -1.97
SOX2P48431 MIR5188-201ENST00000583467 113 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AC010928.2-201ENST00000588017 287 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.73□□□□□ -1.97
SOX2P48431 RMST_6.1-201ENST00000611980 203 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AC137590.2-201ENST00000619709 240 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AL078596.1-201ENST00000624856 447 ntBASIC2.73□□□□□ -1.97
SOX2P48431 AC243829.7-201ENST00000633081 225 ntBASIC2.73□□□□□ -1.97
SOX2P48431 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SOX2P48431 MTND5P16-201ENST00000460269 1703 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms