Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR5696-201ENST00000578474 85 ntBASIC3.04□□□□□ -1.92
MMP13P45452 AC009314.1-201ENST00000603871 304 ntBASIC3.04□□□□□ -1.92
MMP13P45452 AC107294.1-201ENST00000609524 467 ntBASIC3.04□□□□□ -1.92
MMP13P45452 HMGB1P24-202ENST00000615653 685 ntBASIC3.04□□□□□ -1.92
MMP13P45452 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.04□□□□□ -1.92
MMP13P45452 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.04□□□□□ -1.92
MMP13P45452 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
MMP13P45452 FAM35BP-202ENST00000497389 3337 ntBASIC3.04□□□□□ -1.92
MMP13P45452 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
MMP13P45452 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
MMP13P45452 RPL9P7-201ENST00000330965 580 ntBASIC3.03□□□□□ -1.92
MMP13P45452 RNU6-428P-201ENST00000362942 107 ntBASIC3.03□□□□□ -1.92
MMP13P45452 RNU6-166P-201ENST00000384371 107 ntBASIC3.03□□□□□ -1.92
MMP13P45452 RNU6-1197P-201ENST00000391183 107 ntBASIC3.03□□□□□ -1.92
MMP13P45452 SAR1AP2-201ENST00000392696 594 ntBASIC3.03□□□□□ -1.92
MMP13P45452 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
MMP13P45452 RNU6-130P-201ENST00000411112 103 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AC009310.1-201ENST00000414414 451 ntBASIC3.03□□□□□ -1.92
MMP13P45452 TRIAP1P1-201ENST00000427062 225 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AL590383.1-201ENST00000428602 75 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.03□□□□□ -1.92
MMP13P45452 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.03□□□□□ -1.92
MMP13P45452 AL513043.1-201ENST00000439124 535 ntBASIC3.03□□□□□ -1.92
MMP13P45452 OSTCP8-201ENST00000445117 448 ntBASIC3.03□□□□□ -1.92
MMP13P45452 RPL39P40-201ENST00000445481 146 ntBASIC3.03□□□□□ -1.92
MMP13P45452 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
MMP13P45452 RPL9P9-202ENST00000466501 579 ntBASIC3.03□□□□□ -1.92
MMP13P45452 RNU6-1143P-201ENST00000516125 104 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.03□□□□□ -1.92
MMP13P45452 H3F3AP1-201ENST00000559984 334 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.03□□□□□ -1.92
MMP13P45452 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MMP13P45452 MIR4273-201ENST00000582824 84 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AC078899.3-201ENST00000599065 212 ntBASIC3.03□□□□□ -1.92
MMP13P45452 AL162274.2-201ENST00000614406 332 ntBASIC3.03□□□□□ -1.92
MMP13P45452 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.03□□□□□ -1.92
MMP13P45452 AC027309.3-201ENST00000623419 351 ntBASIC3.03□□□□□ -1.92
MMP13P45452 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
MMP13P45452 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
MMP13P45452 AP000560.1-201ENST00000624150 1937 ntBASIC3.02□□□□□ -1.93
MMP13P45452 MIR301A-201ENST00000385261 86 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AL031121.1-201ENST00000406553 254 ntBASIC3.02□□□□□ -1.93
MMP13P45452 RNU6-121P-201ENST00000410525 99 ntBASIC3.02□□□□□ -1.93
MMP13P45452 RNU2-38P-201ENST00000410856 79 ntBASIC3.02□□□□□ -1.93
MMP13P45452 Y_RNA.623-201ENST00000411128 95 ntBASIC3.02□□□□□ -1.93
MMP13P45452 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.02□□□□□ -1.93
MMP13P45452 NDUFB4P7-201ENST00000423198 363 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AC007919.1-201ENST00000429380 217 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AL356867.1-201ENST00000429623 299 ntBASIC3.02□□□□□ -1.93
MMP13P45452 Z98949.2-201ENST00000440996 144 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AC073910.1-201ENST00000445047 438 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.02□□□□□ -1.93
MMP13P45452 AC079354.2-201ENST00000453523 154 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AC091179.1-201ENST00000461606 579 ntBASIC3.02□□□□□ -1.93
MMP13P45452 RPS29P27-201ENST00000463711 170 ntBASIC3.02□□□□□ -1.93
MMP13P45452 RPS20P22-201ENST00000473700 357 ntBASIC3.02□□□□□ -1.93
MMP13P45452 ACA59.1-201ENST00000515966 143 ntBASIC3.02□□□□□ -1.93
MMP13P45452 RNU6-397P-201ENST00000516226 104 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.02□□□□□ -1.93
MMP13P45452 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.02□□□□□ -1.93
MMP13P45452 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.02□□□□□ -1.93
MMP13P45452 MIR4325-201ENST00000583049 90 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AL109918.3-201ENST00000603072 338 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
MMP13P45452 HSPE1P7-201ENST00000604681 321 ntBASIC3.02□□□□□ -1.93
MMP13P45452 MTND4LP5-201ENST00000605152 292 ntBASIC3.02□□□□□ -1.93
MMP13P45452 AC100812.1-201ENST00000607622 580 ntBASIC3.02□□□□□ -1.93
MMP13P45452 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
MMP13P45452 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
MMP13P45452 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.02□□□□□ -1.93
MMP13P45452 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
MMP13P45452 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.02□□□□□ -1.93
MMP13P45452 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.02□□□□□ -1.93
MMP13P45452 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MMP13P45452 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.01□□□□□ -1.93
MMP13P45452 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
MMP13P45452 RNU6-595P-201ENST00000363944 107 ntBASIC3.01□□□□□ -1.93
MMP13P45452 Y_RNA.376-201ENST00000365638 108 ntBASIC3.01□□□□□ -1.93
MMP13P45452 Y_RNA.461-201ENST00000384263 103 ntBASIC3.01□□□□□ -1.93
MMP13P45452 Y_RNA.556-201ENST00000384677 113 ntBASIC3.01□□□□□ -1.93
MMP13P45452 MIR491-201ENST00000384877 84 ntBASIC3.01□□□□□ -1.93
MMP13P45452 SNORA40C-201ENST00000391285 128 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AL591034.2-201ENST00000402839 359 ntBASIC3.01□□□□□ -1.93
MMP13P45452 RNA5SP494-201ENST00000410653 129 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC022018.1-201ENST00000430685 241 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.01□□□□□ -1.93
MMP13P45452 KC877373.1-201ENST00000479066 408 ntBASIC3.01□□□□□ -1.93
MMP13P45452 RPS29P2-201ENST00000479278 136 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC006483.1-201ENST00000487308 313 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC006445.2-201ENST00000510061 472 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.01□□□□□ -1.93
MMP13P45452 SNORA25.11-201ENST00000515935 105 ntBASIC3.01□□□□□ -1.93
MMP13P45452 RNU6-143P-201ENST00000516942 93 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.01□□□□□ -1.93
MMP13P45452 AC109329.1-201ENST00000518744 317 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.01□□□□□ -1.93
MMP13P45452 AC004584.2-201ENST00000570407 410 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.01□□□□□ -1.93
MMP13P45452 MIR3609-201ENST00000582661 80 ntBASIC3.01□□□□□ -1.93
MMP13P45452 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms