Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NKX2-1P43699 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
NKX2-1P43699 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 RNA5SP240-201ENST00000365355 128 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 Y_RNA.356-201ENST00000365475 113 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-1P43699 Y_RNA.431-201ENST00000384086 102 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 SNORA26.3-201ENST00000391119 136 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NKX2-1P43699 RPS20P15-201ENST00000412792 311 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.28□□□□□ -2.04
NKX2-1P43699 AF228730.4-201ENST00000421457 183 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 AC236972.2-201ENST00000434979 310 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NKX2-1P43699 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-1P43699 ELOCP24-201ENST00000456370 334 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 CYP2C59P-201ENST00000457790 269 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.28□□□□□ -2.04
NKX2-1P43699 AC104576.1-201ENST00000524225 88 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-1P43699 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.28□□□□□ -2.04
NKX2-1P43699 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.28□□□□□ -2.04
NKX2-1P43699 ZNF861P-201ENST00000588126 639 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 AL356575.1-201ENST00000603008 283 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX2-1P43699 MIR1302-1-201ENST00000637932 143 ntBASIC2.28□□□□□ -2.04
NKX2-1P43699 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
NKX2-1P43699 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.28□□□□□ -2.05
NKX2-1P43699 AC000403.1-201ENST00000613696 3585 ntBASIC2.28□□□□□ -2.05
NKX2-1P43699 AC073544.1-201ENST00000600110 1595 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NKX2-1P43699 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
NKX2-1P43699 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU6-655P-201ENST00000362858 107 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 Y_RNA.151-201ENST00000363566 112 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU6-1210P-201ENST00000363775 107 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU6-1188P-201ENST00000363795 107 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 SNORA71.1-201ENST00000364523 117 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU6-1317P-201ENST00000364582 104 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 Y_RNA.315-201ENST00000365117 102 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU6-1297P-201ENST00000384415 104 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU6-601P-201ENST00000384540 107 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 Y_RNA.535-201ENST00000384612 99 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 MIR517A-201ENST00000385001 87 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 MIR95-201ENST00000385072 81 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 CBX3P9-201ENST00000402326 552 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU4-14P-201ENST00000410858 122 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-1P43699 AL031659.1-201ENST00000447075 539 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RPL39P29-201ENST00000447779 157 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.27□□□□□ -2.05
NKX2-1P43699 SNORD19B-201ENST00000459623 84 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RPL30P1-201ENST00000488676 339 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 AC022447.4-201ENST00000504053 364 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 RNU2-53P-201ENST00000516257 147 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 Y_RNA.708-201ENST00000516950 96 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 Y_RNA.718-201ENST00000517110 102 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-1P43699 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-1P43699 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.27□□□□□ -2.05
NKX2-1P43699 AC005899.2-201ENST00000584353 90 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 AC011494.1-201ENST00000596454 237 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 CYP2C61P-201ENST00000604072 290 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 AP000654.2-201ENST00000605633 586 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 MIR6128-201ENST00000615528 109 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 AC241585.2-209ENST00000638217 143 ntBASIC2.27□□□□□ -2.05
NKX2-1P43699 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
NKX2-1P43699 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
NKX2-1P43699 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX2-1P43699 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
NKX2-1P43699 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-1P43699 Y_RNA.490-201ENST00000384413 102 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 MIR544A-201ENST00000384855 91 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-1P43699 RNU6-1050P-201ENST00000410388 107 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 EIF1AXP1-201ENST00000419267 435 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 FTH1P25-201ENST00000447665 469 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 Y_RNA.632-201ENST00000459189 102 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX2-1P43699 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 AC008549.1-201ENST00000512900 643 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX2-1P43699 SCARNA13-201ENST00000516672 275 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX2-1P43699 MIR4795-201ENST00000584182 89 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 MIR4719-201ENST00000585233 84 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 AC060766.3-201ENST00000591442 263 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms