Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MTCO2P29-201ENST00000465212 189 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 MTCO3P9-201ENST00000506989 781 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 RN7SKP256-201ENST00000517201 314 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 OSBPL9P5-201ENST00000542581 171 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AC119751.7-201ENST00000600494 245 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 CYP2C61P-201ENST00000604072 290 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AL133173.2-201ENST00000614270 90 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 AL359740.1-201ENST00000624340 592 ntBASIC1.54□□□□□ -2.16
TNFSF9P41273 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TNFSF9P41273 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TNFSF9P41273 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 SNORA20.2-201ENST00000383922 131 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 MIR558-201ENST00000384920 94 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TNFSF9P41273 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TNFSF9P41273 Y_RNA.597-201ENST00000410463 100 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.53□□□□□ -2.16
TNFSF9P41273 SNRPGP13-201ENST00000442212 177 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 AC079448.1-201ENST00000449377 373 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFSF9P41273 AL162395.1-201ENST00000457882 422 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 snoU13.14-201ENST00000459372 104 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 MTCO2P6-201ENST00000463134 685 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 AC098862.1-201ENST00000504991 413 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFSF9P41273 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFSF9P41273 RNU1-86P-201ENST00000516108 154 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 RNU1-107P-201ENST00000516617 154 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFSF9P41273 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.53□□□□□ -2.16
TNFSF9P41273 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 ZNF209P-201ENST00000593450 2304 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 AC064872.1-201ENST00000604823 1072 ntBASIC1.53□□□□□ -2.16
TNFSF9P41273 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.53□□□□□ -2.16
TNFSF9P41273 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.53□□□□□ -2.16
TNFSF9P41273 RNU1-58P-201ENST00000362413 163 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 Y_RNA.381-201ENST00000365666 102 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 RNU6-606P-201ENST00000384721 111 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 RNY3P10-201ENST00000384764 102 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 Y_RNA.576-201ENST00000384781 102 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AC068050.1-201ENST00000394891 380 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 RN7SKP142-201ENST00000411236 328 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 BTF3L4P1-201ENST00000413813 468 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 UBE2V1P4-201ENST00000425374 344 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 MED13P1-201ENST00000428342 171 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AL358934.1-201ENST00000432346 324 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFSF9P41273 RPL39P29-201ENST00000447779 157 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFSF9P41273 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFSF9P41273 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.52□□□□□ -2.17
TNFSF9P41273 MTCO3P28-201ENST00000513351 515 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 SNORA18.6-201ENST00000516792 115 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AP002453.2-201ENST00000533503 320 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFSF9P41273 MIR5692A1-201ENST00000580523 69 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 Z94722.1-201ENST00000604328 474 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 AC073114.1-201ENST00000612027 490 ntBASIC1.52□□□□□ -2.17
TNFSF9P41273 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFSF9P41273 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFSF9P41273 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFSF9P41273 AC245060.5-201ENST00000610778 3293 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RNU6-527P-201ENST00000363425 104 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RNY1P12-201ENST00000364251 105 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RNU6-371P-201ENST00000364283 108 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RNU6-1303P-201ENST00000364841 107 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 Y_RNA.367-201ENST00000365544 101 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RNU6-74P-201ENST00000384235 107 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 SNORD116-8-201ENST00000384365 95 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
TNFSF9P41273 RAP1BP3-201ENST00000407180 549 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 MTND3P17-201ENST00000416968 344 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 AL590556.1-201ENST00000423231 483 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RPS6P15-201ENST00000431996 751 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RPS15AP10-201ENST00000432472 382 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TNFSF9P41273 AL122001.1-201ENST00000457027 370 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 RPL30P1-201ENST00000488676 339 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFSF9P41273 MTND2P33-201ENST00000506452 1031 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 MTND1P22-201ENST00000510572 951 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.51□□□□□ -2.17
TNFSF9P41273 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFSF9P41273 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.51□□□□□ -2.17
TNFSF9P41273 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.51□□□□□ -2.17
TNFSF9P41273 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFSF9P41273 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 AC073539.2-201ENST00000597113 165 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 NIFKP6-201ENST00000598115 845 ntBASIC1.51□□□□□ -2.17
TNFSF9P41273 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
TNFSF9P41273 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms