Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL121757.2-201ENST00000611223 313 ntBASIC2.49□□□□□ -2.01
HOXD13P35453 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXD13P35453 AC092268.1-201ENST00000342691 405 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 RNY3P3-201ENST00000363816 102 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 RNU6-142P-201ENST00000384019 107 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 MIR23A-201ENST00000385245 73 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 SNRPEP10-201ENST00000420249 274 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXD13P35453 CBX3P6-201ENST00000430257 527 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 U8.21-201ENST00000459536 136 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 AC114801.2-201ENST00000503825 781 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 AC025423.5-201ENST00000550230 219 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXD13P35453 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXD13P35453 AC010525.2-201ENST00000590920 195 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXD13P35453 AL034555.1-201ENST00000604816 211 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 AC018889.1-201ENST00000605372 397 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 AC139792.2-201ENST00000624218 587 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 SNORD98-201ENST00000636377 67 ntBASIC2.48□□□□□ -2.01
HOXD13P35453 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXD13P35453 RNY4P14-201ENST00000363656 96 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 BTF3L4P2-201ENST00000392798 346 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 RNU6-373P-201ENST00000411247 98 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AL590135.1-201ENST00000422215 156 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AC019205.3-201ENST00000424573 156 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXD13P35453 AC016700.2-201ENST00000446011 156 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXD13P35453 AC015911.1-201ENST00000495111 156 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 HMGB3P3-201ENST00000510526 400 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 SNORA4.4-201ENST00000515921 135 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 RNU6-567P-201ENST00000516746 107 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AC022616.8-201ENST00000533569 253 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXD13P35453 NDUFA5P6-201ENST00000542110 379 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AC018630.3-201ENST00000542637 96 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXD13P35453 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXD13P35453 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXD13P35453 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXD13P35453 AC068137.4-201ENST00000638485 296 ntBASIC2.47□□□□□ -2.01
HOXD13P35453 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXD13P35453 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXD13P35453 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXD13P35453 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
HOXD13P35453 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
HOXD13P35453 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 RNU6-1329P-201ENST00000365664 107 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 SNORD73A-201ENST00000386062 65 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 SNORA40.19-201ENST00000390846 128 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 AP000275.1-201ENST00000411943 390 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 EDDM3CP-201ENST00000415977 425 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 MRPS10P2-201ENST00000431226 381 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 AL133396.1-201ENST00000432048 687 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 IFNA11P-201ENST00000446352 526 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 AC107222.1-201ENST00000510899 637 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 RNA5SP137-201ENST00000516833 135 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 MTND1P35-201ENST00000526739 508 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.46□□□□□ -2.02
HOXD13P35453 SNRPGP17-201ENST00000603780 214 ntBASIC2.46□□□□□ -2.02
HOXD13P35453 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.46□□□□□ -2.02
HOXD13P35453 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HOXD13P35453 Z82195.2-201ENST00000612348 18351 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HOXD13P35453 Y_RNA.38-201ENST00000362617 102 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 SNORD32A-201ENST00000364805 84 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 Y_RNA.373-201ENST00000365600 103 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 RNU6-611P-201ENST00000384276 104 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 MIR450B-201ENST00000401182 78 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 Y_RNA.597-201ENST00000410463 100 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 MTCO1P21-201ENST00000416634 589 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXD13P35453 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXD13P35453 UBE2V1P4-201ENST00000425374 344 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 RPL23AP95-201ENST00000426806 265 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXD13P35453 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.45□□□□□ -2.02
HOXD13P35453 AC245102.2-201ENST00000448956 180 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXD13P35453 SNORA59A-201ENST00000459326 152 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXD13P35453 TRBVA-201ENST00000498804 316 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXD13P35453 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 MTND1P5-201ENST00000517906 940 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 AP005597.4-201ENST00000526762 229 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXD13P35453 AC087241.2-201ENST00000535801 324 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 TRAV32-201ENST00000553993 340 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 TPRKBP2-201ENST00000565969 475 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 MIR3923-201ENST00000579521 83 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 AC100830.2-201ENST00000581636 240 ntBASIC2.45□□□□□ -2.02
HOXD13P35453 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXD13P35453 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
HOXD13P35453 AC063943.3-201ENST00000615562 356 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms