Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR5692A1-201ENST00000580523 69 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
RPA3P35244 AL034555.1-201ENST00000604816 211 ntBASIC1.11□□□□□ -2.23
RPA3P35244 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.11□□□□□ -2.23
RPA3P35244 RMST_4.1-201ENST00000616886 107 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AL445984.1-201ENST00000637834 659 ntBASIC1.11□□□□□ -2.23
RPA3P35244 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
RPA3P35244 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RPA3P35244 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPA3P35244 RNU6-61P-201ENST00000365528 109 ntBASIC1.1□□□□□ -2.23
RPA3P35244 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPA3P35244 RNU6-26P-201ENST00000383985 107 ntBASIC1.1□□□□□ -2.23
RPA3P35244 MIR558-201ENST00000384920 94 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.1□□□□□ -2.23
RPA3P35244 AC123900.1-201ENST00000420390 96 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.1□□□□□ -2.23
RPA3P35244 AC139712.2-201ENST00000424302 339 ntBASIC1.1□□□□□ -2.23
RPA3P35244 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.1□□□□□ -2.23
RPA3P35244 RPS24P1-201ENST00000438550 371 ntBASIC1.1□□□□□ -2.23
RPA3P35244 JTBP1-201ENST00000441314 247 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.1□□□□□ -2.23
RPA3P35244 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.1□□□□□ -2.23
RPA3P35244 MTCO2P29-201ENST00000465212 189 ntBASIC1.1□□□□□ -2.23
RPA3P35244 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.1□□□□□ -2.23
RPA3P35244 AC005741.1-201ENST00000511094 432 ntBASIC1.1□□□□□ -2.23
RPA3P35244 TRMT112P2-201ENST00000512910 132 ntBASIC1.1□□□□□ -2.23
RPA3P35244 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.1□□□□□ -2.23
RPA3P35244 AC115990.1-201ENST00000526957 301 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC005668.1-201ENST00000571142 476 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC018714.1-201ENST00000605028 208 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AL031775.1-201ENST00000607014 887 ntBASIC1.1□□□□□ -2.23
RPA3P35244 RNU6-87P-201ENST00000607561 108 ntBASIC1.1□□□□□ -2.23
RPA3P35244 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPA3P35244 AL121890.5-201ENST00000620848 304 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AP002371.2-201ENST00000624450 503 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC019226.2-201ENST00000625973 424 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC095038.3-201ENST00000634439 195 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC100821.1-201ENST00000523153 2479 ntBASIC1.1□□□□□ -2.23
RPA3P35244 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.09□□□□□ -2.23
RPA3P35244 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.09□□□□□ -2.23
RPA3P35244 AL391994.1-201ENST00000254724 282 ntBASIC1.09□□□□□ -2.23
RPA3P35244 ELOCP4-201ENST00000420090 333 ntBASIC1.09□□□□□ -2.23
RPA3P35244 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.09□□□□□ -2.23
RPA3P35244 MED13P1-201ENST00000428342 171 ntBASIC1.09□□□□□ -2.23
RPA3P35244 HSPE1P9-201ENST00000440046 311 ntBASIC1.09□□□□□ -2.23
RPA3P35244 SNRPGP7-201ENST00000469016 106 ntBASIC1.09□□□□□ -2.23
RPA3P35244 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
RPA3P35244 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.09□□□□□ -2.23
RPA3P35244 RNU6-1053P-201ENST00000515930 101 ntBASIC1.09□□□□□ -2.23
RPA3P35244 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
RPA3P35244 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.09□□□□□ -2.23
RPA3P35244 AC087883.1-201ENST00000551882 391 ntBASIC1.09□□□□□ -2.23
RPA3P35244 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.09□□□□□ -2.23
RPA3P35244 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
RPA3P35244 AC090888.2-201ENST00000559765 1144 ntBASIC1.09□□□□□ -2.23
RPA3P35244 HMGB1P33-201ENST00000563485 527 ntBASIC1.09□□□□□ -2.23
RPA3P35244 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.09□□□□□ -2.23
RPA3P35244 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.09□□□□□ -2.23
RPA3P35244 AC110760.3-201ENST00000598794 467 ntBASIC1.09□□□□□ -2.23
RPA3P35244 SNORD98-201ENST00000636377 67 ntBASIC1.09□□□□□ -2.23
RPA3P35244 U4.7-201ENST00000638126 106 ntBASIC1.09□□□□□ -2.23
RPA3P35244 Y_RNA.22-201ENST00000362492 102 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MIR548B-201ENST00000385247 97 ntBASIC1.08□□□□□ -2.24
RPA3P35244 RNU2-3P-201ENST00000410144 191 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.08□□□□□ -2.24
RPA3P35244 CYCSP33-201ENST00000414485 327 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MTCO3P41-201ENST00000414801 328 ntBASIC1.08□□□□□ -2.24
RPA3P35244 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.08□□□□□ -2.24
RPA3P35244 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MTND1P30-201ENST00000441241 901 ntBASIC1.08□□□□□ -2.24
RPA3P35244 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.08□□□□□ -2.24
RPA3P35244 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.08□□□□□ -2.24
RPA3P35244 RNA5SP269-201ENST00000459032 137 ntBASIC1.08□□□□□ -2.24
RPA3P35244 AC005840.1-201ENST00000498412 377 ntBASIC1.08□□□□□ -2.24
RPA3P35244 AC108078.1-201ENST00000508073 725 ntBASIC1.08□□□□□ -2.24
RPA3P35244 ATP5EP1-201ENST00000510257 156 ntBASIC1.08□□□□□ -2.24
RPA3P35244 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
RPA3P35244 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.08□□□□□ -2.24
RPA3P35244 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.08□□□□□ -2.24
RPA3P35244 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.08□□□□□ -2.24
RPA3P35244 RPL21P5-201ENST00000554662 472 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MTND4P33-201ENST00000556706 766 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MIR4999-201ENST00000585029 91 ntBASIC1.08□□□□□ -2.24
RPA3P35244 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
RPA3P35244 AP000811.1-201ENST00000603803 651 ntBASIC1.08□□□□□ -2.24
RPA3P35244 AC090578.1-201ENST00000604955 591 ntBASIC1.08□□□□□ -2.24
RPA3P35244 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RPA3P35244 AL078604.3-201ENST00000615580 211 ntBASIC1.08□□□□□ -2.24
RPA3P35244 AC092140.2-201ENST00000618027 521 ntBASIC1.08□□□□□ -2.24
RPA3P35244 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
RPA3P35244 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
RPA3P35244 RNU5F-6P-201ENST00000362979 116 ntBASIC1.07□□□□□ -2.24
RPA3P35244 RNU6-105P-201ENST00000363909 104 ntBASIC1.07□□□□□ -2.24
RPA3P35244 MRPL42P2-201ENST00000403169 426 ntBASIC1.07□□□□□ -2.24
RPA3P35244 Y_RNA.608-201ENST00000410647 95 ntBASIC1.07□□□□□ -2.24
RPA3P35244 RNU6-607P-201ENST00000411283 108 ntBASIC1.07□□□□□ -2.24
RPA3P35244 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RPA3P35244 MTCO2P23-201ENST00000425216 680 ntBASIC1.07□□□□□ -2.24
RPA3P35244 C8orf59P1-201ENST00000429930 303 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms