Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RNU6-827P-201ENST00000365553 106 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 Y_RNA.399-201ENST00000383955 105 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 RNU6-517P-201ENST00000384362 110 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 RN7SKP61-201ENST00000410642 295 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 POLHP1-201ENST00000411806 470 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.09□□□□□ -2.07
CTNNA1P35221 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA1P35221 SNAP23P1-201ENST00000433229 246 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.09□□□□□ -2.07
CTNNA1P35221 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.09□□□□□ -2.07
CTNNA1P35221 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA1P35221 RNU7-167P-201ENST00000459160 62 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 ARL2BPP4-201ENST00000506854 471 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.09□□□□□ -2.07
CTNNA1P35221 SNORA31.16-201ENST00000516773 139 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA1P35221 HSPE1P4-201ENST00000550617 308 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA1P35221 AC103996.1-201ENST00000555468 102 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 AC022254.1-201ENST00000567857 235 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.09□□□□□ -2.07
CTNNA1P35221 AC025754.2-201ENST00000606491 432 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 U2.17-201ENST00000611454 95 ntBASIC2.09□□□□□ -2.07
CTNNA1P35221 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CTNNA1P35221 RNU6-348P-201ENST00000384386 107 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 RNU6-903P-201ENST00000391270 109 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 RNA5SP489-201ENST00000410986 109 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 USP9YP29-201ENST00000445112 563 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 RNU7-63P-201ENST00000459054 62 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 RNU6-333P-201ENST00000459117 107 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
CTNNA1P35221 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.08□□□□□ -2.08
CTNNA1P35221 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CTNNA1P35221 AC010493.1-201ENST00000513479 292 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.08□□□□□ -2.08
CTNNA1P35221 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 AC233981.2-201ENST00000611524 1614 ntBASIC2.08□□□□□ -2.08
CTNNA1P35221 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CTNNA1P35221 ELL2P3-201ENST00000457883 1602 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 RNU4-82P-201ENST00000362443 140 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 Y_RNA.159-201ENST00000363674 87 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 SNORD32A-201ENST00000364805 84 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 RNU6-234P-201ENST00000365229 104 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 SNORA64-201ENST00000384674 134 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 AL033519.2-201ENST00000403958 392 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.07□□□□□ -2.08
CTNNA1P35221 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.07□□□□□ -2.08
CTNNA1P35221 AL035666.1-201ENST00000446195 348 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 HMGB3P17-201ENST00000504195 649 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 AC005741.1-201ENST00000511094 432 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 Y_RNA.688-201ENST00000516565 95 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.07□□□□□ -2.08
CTNNA1P35221 HIF1AP1-201ENST00000553642 175 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.07□□□□□ -2.08
CTNNA1P35221 MIR4528-201ENST00000577763 90 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 MIR5583-1-201ENST00000580941 59 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 MTATP6P3-201ENST00000581686 676 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 AL356157.2-201ENST00000605122 111 ntBASIC2.07□□□□□ -2.08
CTNNA1P35221 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CTNNA1P35221 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CTNNA1P35221 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CTNNA1P35221 RNU6-26P-201ENST00000383985 107 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC009310.1-201ENST00000414414 451 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.06□□□□□ -2.08
CTNNA1P35221 AC078809.1-201ENST00000427601 140 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 RNU6-956P-201ENST00000458868 103 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
CTNNA1P35221 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.06□□□□□ -2.08
CTNNA1P35221 MTND2P38-201ENST00000522536 667 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AP000873.5-201ENST00000533906 236 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 GNAI2P1-201ENST00000541815 315 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.06□□□□□ -2.08
CTNNA1P35221 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AL590240.4-201ENST00000616908 390 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC136475.10-201ENST00000620253 385 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 MIR6852-201ENST00000621699 66 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC005609.4-201ENST00000625071 447 ntBASIC2.06□□□□□ -2.08
CTNNA1P35221 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CTNNA1P35221 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CTNNA1P35221 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CTNNA1P35221 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
CTNNA1P35221 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
CTNNA1P35221 CBX3P1-201ENST00000325243 554 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 MIR449A-201ENST00000362113 91 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 SNORA75-201ENST00000384158 137 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 SNORA48.1-201ENST00000390879 135 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 MTCYBP2-201ENST00000407745 171 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 MTCYBP8-201ENST00000422855 651 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.05□□□□□ -2.08
CTNNA1P35221 RPL23AP95-201ENST00000426806 265 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 AC073464.1-201ENST00000429823 534 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.05□□□□□ -2.08
CTNNA1P35221 AC016632.1-201ENST00000503994 196 ntBASIC2.05□□□□□ -2.08
CTNNA1P35221 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.05□□□□□ -2.08
CTNNA1P35221 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CTNNA1P35221 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.05□□□□□ -2.08
CTNNA1P35221 HSPE1P18-201ENST00000517602 280 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms