Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SNORD56.1-201ENST00000362913 68 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 Y_RNA.149-201ENST00000363558 117 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 RNU4-9P-201ENST00000364951 139 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 SNORD14.1-201ENST00000365609 90 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 RNU6-142P-201ENST00000384019 107 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 RNU6-843P-201ENST00000384454 104 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 Y_RNA.510-201ENST00000384511 114 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 SNORA69.1-201ENST00000390904 137 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 Y_RNA.645-201ENST00000391229 102 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC6A4P31645 RNU7-175P-201ENST00000515915 61 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 SNORA31.1-201ENST00000515993 133 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 SNORA31.5-201ENST00000516190 133 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC6A4P31645 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC6A4P31645 AC060766.3-201ENST00000591442 263 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC6A4P31645 AL137843.1-201ENST00000605078 385 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 AC100812.1-201ENST00000607622 580 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 AC097372.5-201ENST00000623665 376 ntBASIC3.24□□□□□ -1.89
SLC6A4P31645 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC6A4P31645 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A4P31645 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A4P31645 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A4P31645 AC233981.2-201ENST00000611524 1614 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AC091812.1-201ENST00000432235 1948 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A4P31645 SNORA63.7-201ENST00000365579 123 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A4P31645 SNORA54-201ENST00000384281 123 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNU6-196P-201ENST00000384315 107 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNU6-823P-201ENST00000391042 103 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 MIR1302-3-201ENST00000408128 138 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNA5SP390-201ENST00000410191 113 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RPS15AP5-201ENST00000436276 388 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AL161651.1-201ENST00000440882 223 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AC007969.2-201ENST00000441891 191 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.23□□□□□ -1.89
SLC6A4P31645 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.23□□□□□ -1.89
SLC6A4P31645 RPL27AP5-201ENST00000469428 449 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AC008885.1-201ENST00000514930 301 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 MTCO2P24-201ENST00000515611 426 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNU6-581P-201ENST00000516214 105 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNA5SP341-201ENST00000516261 117 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 ACA59.2-201ENST00000517061 156 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 LARP7P3-201ENST00000579888 337 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AL355297.3-201ENST00000604082 446 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A4P31645 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AL132822.1-201ENST00000617063 513 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 SCARNA4-201ENST00000629045 128 ntBASIC3.23□□□□□ -1.89
SLC6A4P31645 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.23□□□□□ -1.89
SLC6A4P31645 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SLC6A4P31645 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
SLC6A4P31645 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SLC6A4P31645 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.22□□□□□ -1.89
SLC6A4P31645 Y_RNA.176-201ENST00000363815 109 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A4P31645 RNU6-968P-201ENST00000384076 107 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR628-201ENST00000385229 95 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 SNORD67-201ENST00000390833 111 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 RNA5SP494-201ENST00000410653 129 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 AC096649.2-201ENST00000416186 393 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 RPL23AP95-201ENST00000426806 265 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MTCYBP9-201ENST00000431021 303 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC6A4P31645 AL441985.1-201ENST00000457727 251 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A4P31645 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.22□□□□□ -1.89
SLC6A4P31645 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 Y_RNA.706-201ENST00000516933 99 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR2355-201ENST00000517199 87 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 SNORA31.23-201ENST00000517219 133 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.22□□□□□ -1.89
SLC6A4P31645 AC006600.1-201ENST00000572529 153 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR1244-1-201ENST00000612829 85 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 AC138305.3-201ENST00000624988 240 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR1244-3-201ENST00000635744 85 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR1244-2-201ENST00000636449 85 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 MIR1244-4-202ENST00000636813 85 ntBASIC3.22□□□□□ -1.89
SLC6A4P31645 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC6A4P31645 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SLC6A4P31645 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC6A4P31645 RNU6-1141P-201ENST00000364520 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 RNU6-1286P-201ENST00000383871 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 RNU6-1222P-201ENST00000384615 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 RNU6-748P-201ENST00000384648 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 Y_RNA.557-201ENST00000384680 107 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 SNORA12.2-201ENST00000391040 156 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 HMGB3P2-201ENST00000411913 584 ntBASIC3.21□□□□□ -1.9
SLC6A4P31645 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms