Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MIR19A-201ENST00000384878 82 ntBASIC0.37□□□□□ -2.35
SDC4P31431 MIR518E-201ENST00000385252 88 ntBASIC0.37□□□□□ -2.35
SDC4P31431 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
SDC4P31431 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
SDC4P31431 RAB28P5-201ENST00000427490 651 ntBASIC0.37□□□□□ -2.35
SDC4P31431 AC002429.1-201ENST00000437672 148 ntBASIC0.37□□□□□ -2.35
SDC4P31431 RPS26P45-201ENST00000471748 340 ntBASIC0.37□□□□□ -2.35
SDC4P31431 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.37□□□□□ -2.35
SDC4P31431 MTND1P36-201ENST00000522384 936 ntBASIC0.37□□□□□ -2.35
SDC4P31431 AL121579.1-201ENST00000555129 305 ntBASIC0.37□□□□□ -2.35
SDC4P31431 AL157871.3-201ENST00000557231 293 ntBASIC0.37□□□□□ -2.35
SDC4P31431 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.37□□□□□ -2.35
SDC4P31431 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.37□□□□□ -2.35
SDC4P31431 AC007363.1-201ENST00000604736 620 ntBASIC0.37□□□□□ -2.35
SDC4P31431 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
SDC4P31431 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.37□□□□□ -2.35
SDC4P31431 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SDC4P31431 SNORD3E-201ENST00000362899 217 ntBASIC0.36□□□□□ -2.35
SDC4P31431 RNU4-12P-201ENST00000365233 139 ntBASIC0.36□□□□□ -2.35
SDC4P31431 SNORA12-201ENST00000391162 147 ntBASIC0.36□□□□□ -2.35
SDC4P31431 RNU1-139P-201ENST00000391307 165 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.36□□□□□ -2.35
SDC4P31431 BX664727.1-201ENST00000416024 466 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.36□□□□□ -2.35
SDC4P31431 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.36□□□□□ -2.35
SDC4P31431 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
SDC4P31431 MTCO3P29-201ENST00000432119 779 ntBASIC0.36□□□□□ -2.35
SDC4P31431 ZFAND6P1-201ENST00000434138 605 ntBASIC0.36□□□□□ -2.35
SDC4P31431 MTND2P33-201ENST00000506452 1031 ntBASIC0.36□□□□□ -2.35
SDC4P31431 RNU6-150P-201ENST00000516237 95 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AL590705.4-201ENST00000532209 134 ntBASIC0.36□□□□□ -2.35
SDC4P31431 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
SDC4P31431 AL442163.3-201ENST00000554110 156 ntBASIC0.36□□□□□ -2.35
SDC4P31431 MIR1273C-201ENST00000578669 77 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AC068790.6-201ENST00000602558 258 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
SDC4P31431 MIR3976-201ENST00000606807 139 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
SDC4P31431 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.36□□□□□ -2.35
SDC4P31431 AC231657.1-201ENST00000624313 397 ntBASIC0.36□□□□□ -2.35
SDC4P31431 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.36□□□□□ -2.35
SDC4P31431 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.35□□□□□ -2.35
SDC4P31431 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.35□□□□□ -2.35
SDC4P31431 RNU6-1123P-201ENST00000362347 106 ntBASIC0.35□□□□□ -2.35
SDC4P31431 Y_RNA.33-201ENST00000362591 102 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RNU6-862P-201ENST00000362804 105 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RNU6-777P-201ENST00000364265 104 ntBASIC0.35□□□□□ -2.35
SDC4P31431 SNORD32B-201ENST00000364460 84 ntBASIC0.35□□□□□ -2.35
SDC4P31431 SNORA4.2-201ENST00000365313 147 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RNU6-72P-201ENST00000384285 79 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RNU6-910P-201ENST00000390844 107 ntBASIC0.35□□□□□ -2.35
SDC4P31431 AL365338.1-201ENST00000422282 858 ntBASIC0.35□□□□□ -2.35
SDC4P31431 MTCYBP5-201ENST00000423752 1135 ntBASIC0.35□□□□□ -2.35
SDC4P31431 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.35□□□□□ -2.35
SDC4P31431 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.35□□□□□ -2.35
SDC4P31431 AL583843.1-201ENST00000456070 346 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RPL39P38-201ENST00000467018 153 ntBASIC0.35□□□□□ -2.35
SDC4P31431 MTCO3P28-201ENST00000513351 515 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RNA5SP436-201ENST00000516020 115 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RNU6-1225P-201ENST00000516336 65 ntBASIC0.35□□□□□ -2.35
SDC4P31431 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
SDC4P31431 OR4H6P-202ENST00000603819 340 ntBASIC0.35□□□□□ -2.35
SDC4P31431 AC105148.1-201ENST00000604961 409 ntBASIC0.35□□□□□ -2.35
SDC4P31431 RPL21P136-201ENST00000605378 396 ntBASIC0.35□□□□□ -2.35
SDC4P31431 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
SDC4P31431 PCMTD1P7-201ENST00000634506 357 ntBASIC0.35□□□□□ -2.35
SDC4P31431 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
SDC4P31431 RNA5SP259-201ENST00000365541 109 ntBASIC0.34□□□□□ -2.36
SDC4P31431 RNU6-395P-201ENST00000365662 106 ntBASIC0.34□□□□□ -2.36
SDC4P31431 SNORD116-20-201ENST00000384529 92 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
SDC4P31431 RNA5SP193-201ENST00000410353 107 ntBASIC0.34□□□□□ -2.36
SDC4P31431 MTCO1P21-201ENST00000416634 589 ntBASIC0.34□□□□□ -2.36
SDC4P31431 SNRPEP8-201ENST00000442866 260 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AC104806.1-201ENST00000508720 308 ntBASIC0.34□□□□□ -2.36
SDC4P31431 SNORA31.2-201ENST00000516019 134 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.34□□□□□ -2.36
SDC4P31431 AC023050.2-201ENST00000544968 387 ntBASIC0.34□□□□□ -2.36
SDC4P31431 BNIP3P6-201ENST00000549284 499 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AC087897.1-201ENST00000550134 156 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.34□□□□□ -2.36
SDC4P31431 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.34□□□□□ -2.36
SDC4P31431 AC091489.2-201ENST00000566263 604 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AC069545.1-201ENST00000605671 358 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AC068787.1-201ENST00000623908 691 ntBASIC0.34□□□□□ -2.36
SDC4P31431 AC106858.1-201ENST00000637497 429 ntBASIC0.34□□□□□ -2.36
SDC4P31431 Y_RNA.363-201ENST00000365529 113 ntBASIC0.33□□□□□ -2.36
SDC4P31431 SNORA12.2-201ENST00000391040 156 ntBASIC0.33□□□□□ -2.36
SDC4P31431 RNU6-1054P-201ENST00000411293 104 ntBASIC0.33□□□□□ -2.36
SDC4P31431 COX6CP10-201ENST00000416832 224 ntBASIC0.33□□□□□ -2.36
SDC4P31431 ARL5AP1-201ENST00000418991 388 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
SDC4P31431 ATP5J2P3-201ENST00000451550 258 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC006026.2-201ENST00000457376 180 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC048334.1-201ENST00000477975 159 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC098869.1-201ENST00000481627 292 ntBASIC0.33□□□□□ -2.36
SDC4P31431 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SDC4P31431 AC121161.1-201ENST00000510606 652 ntBASIC0.33□□□□□ -2.36
SDC4P31431 RNA5SP255-201ENST00000516370 107 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC021451.1-201ENST00000523498 1129 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms