Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC104073.3-201ENST00000610942 955 ntBASIC1.78□□□□□ -2.12
HOXA9P31269 RMST_4.1-201ENST00000616886 107 ntBASIC1.78□□□□□ -2.12
HOXA9P31269 AC005609.4-201ENST00000625071 447 ntBASIC1.78□□□□□ -2.12
HOXA9P31269 Y_RNA.41-201ENST00000362646 102 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 RNU6-1303P-201ENST00000364841 107 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 RNU6-1127P-201ENST00000384580 107 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 MTCYBP8-201ENST00000422855 651 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXA9P31269 AL163540.1-201ENST00000485382 386 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC079382.1-201ENST00000493346 557 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.77□□□□□ -2.13
HOXA9P31269 AC104136.1-201ENST00000512969 394 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC105417.1-201ENST00000514691 285 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 SNORA25.11-201ENST00000515935 105 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 RNU5B-3P-201ENST00000516601 115 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.77□□□□□ -2.13
HOXA9P31269 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.77□□□□□ -2.13
HOXA9P31269 BNIP3P6-201ENST00000549284 499 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 DNAJC19P9-201ENST00000555084 351 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 MTCYBP33-201ENST00000575007 1130 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXA9P31269 AL670379.10-201ENST00000604330 253 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AL138963.2-201ENST00000605137 226 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AL670379.9-201ENST00000605428 253 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AL359821.1-201ENST00000605519 182 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC017083.3-201ENST00000609955 700 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 AC068792.1-201ENST00000621354 417 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 RMST_7.1-201ENST00000621935 268 ntBASIC1.77□□□□□ -2.13
HOXA9P31269 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
HOXA9P31269 AL359854.1-201ENST00000614203 1594 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HOXA9P31269 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HOXA9P31269 RNY1P10-201ENST00000363268 113 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 Y_RNA.318-201ENST00000365131 97 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HOXA9P31269 Y_RNA.409-201ENST00000383990 98 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 Y_RNA.559-201ENST00000384686 107 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 SNORA16.2-201ENST00000390991 127 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 RNU2-16P-201ENST00000410712 136 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 RNU4-55P-201ENST00000410731 137 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 RNU4-46P-201ENST00000410818 138 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 UBE2V1P10-201ENST00000414685 269 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXA9P31269 AL606489.2-201ENST00000433886 234 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXA9P31269 AC092473.1-201ENST00000441098 221 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC009238.1-201ENST00000442165 424 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC009237.6-201ENST00000446969 424 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC073415.1-201ENST00000449240 153 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXA9P31269 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXA9P31269 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXA9P31269 SCARNA18-201ENST00000459004 134 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 GMFBP1-201ENST00000467831 427 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC010493.1-201ENST00000513479 292 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 CR383656.8-201ENST00000549046 145 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 MIR3618-201ENST00000580330 88 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 MIR5583-1-201ENST00000580941 59 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 MIR4781-201ENST00000585250 76 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AP001596.2-201ENST00000608410 312 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AL512598.1-201ENST00000610158 273 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.76□□□□□ -2.13
HOXA9P31269 uc_338.11-201ENST00000619132 160 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.76□□□□□ -2.13
HOXA9P31269 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HOXA9P31269 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.76□□□□□ -2.13
HOXA9P31269 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HOXA9P31269 RNU6-552P-201ENST00000362869 119 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 RNU1-72P-201ENST00000362976 153 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 SNORD70.1-201ENST00000391007 85 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 RNU2-29P-201ENST00000410423 189 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AL158823.1-201ENST00000418441 478 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 AC096920.1-201ENST00000423991 241 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AL589823.1-201ENST00000429577 183 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXA9P31269 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 AC112771.1-201ENST00000463581 102 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 AP001025.1-201ENST00000486139 332 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AC140059.1-201ENST00000489238 361 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 HMGB1P30-201ENST00000492455 606 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HOXA9P31269 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HOXA9P31269 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXA9P31269 AC074344.1-201ENST00000512823 224 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 RNU2-69P-201ENST00000516061 100 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 Y_RNA.673-201ENST00000516306 88 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 RNA5SP137-201ENST00000516833 135 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.75□□□□□ -2.13
HOXA9P31269 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXA9P31269 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXA9P31269 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms