Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RXRBP28702 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.41□□□□□ -1.7
RXRBP28702 NDUFB1P1-201ENST00000435191 180 ntBASIC4.41□□□□□ -1.7
RXRBP28702 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.41□□□□□ -1.7
RXRBP28702 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.41□□□□□ -1.7
RXRBP28702 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
RXRBP28702 HSPE1P6-201ENST00000479457 291 ntBASIC4.41□□□□□ -1.7
RXRBP28702 TRBV12-2-201ENST00000489763 344 ntBASIC4.41□□□□□ -1.7
RXRBP28702 RPL31P61-201ENST00000496160 376 ntBASIC4.41□□□□□ -1.7
RXRBP28702 RN7SKP132-201ENST00000516001 208 ntBASIC4.41□□□□□ -1.7
RXRBP28702 Y_RNA.706-201ENST00000516933 99 ntBASIC4.41□□□□□ -1.7
RXRBP28702 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.41□□□□□ -1.7
RXRBP28702 NDUFB9P3-201ENST00000521269 501 ntBASIC4.41□□□□□ -1.7
RXRBP28702 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RXRBP28702 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RXRBP28702 AC005476.1-201ENST00000554427 397 ntBASIC4.41□□□□□ -1.7
RXRBP28702 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.41□□□□□ -1.7
RXRBP28702 AL162424.1-201ENST00000602325 221 ntBASIC4.41□□□□□ -1.7
RXRBP28702 AL078605.1-201ENST00000603529 500 ntBASIC4.41□□□□□ -1.7
RXRBP28702 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.41□□□□□ -1.7
RXRBP28702 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RXRBP28702 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.41□□□□□ -1.7
RXRBP28702 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.41□□□□□ -1.7
RXRBP28702 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.7
RXRBP28702 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.4□□□□□ -1.7
RXRBP28702 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RXRBP28702 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RXRBP28702 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RXRBP28702 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RXRBP28702 AC062016.1-201ENST00000355719 319 ntBASIC4.4□□□□□ -1.71
RXRBP28702 RNU6-227P-201ENST00000362865 103 ntBASIC4.4□□□□□ -1.71
RXRBP28702 Y_RNA.233-201ENST00000364407 101 ntBASIC4.4□□□□□ -1.71
RXRBP28702 RNU6-326P-201ENST00000365480 107 ntBASIC4.4□□□□□ -1.71
RXRBP28702 Y_RNA.398-201ENST00000383952 99 ntBASIC4.4□□□□□ -1.71
RXRBP28702 RNU6-1135P-201ENST00000411083 103 ntBASIC4.4□□□□□ -1.71
RXRBP28702 AL591043.1-201ENST00000432461 424 ntBASIC4.4□□□□□ -1.71
RXRBP28702 AL109933.2-201ENST00000452651 260 ntBASIC4.4□□□□□ -1.71
RXRBP28702 AL645939.1-201ENST00000453429 797 ntBASIC4.4□□□□□ -1.71
RXRBP28702 RPS26P21-201ENST00000475397 348 ntBASIC4.4□□□□□ -1.71
RXRBP28702 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.4□□□□□ -1.71
RXRBP28702 RNU7-175P-201ENST00000515915 61 ntBASIC4.4□□□□□ -1.71
RXRBP28702 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.4□□□□□ -1.71
RXRBP28702 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RXRBP28702 SNORD84-203ENST00000584275 78 ntBASIC4.4□□□□□ -1.71
RXRBP28702 AP001485.1-201ENST00000604799 199 ntBASIC4.4□□□□□ -1.71
RXRBP28702 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RXRBP28702 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RXRBP28702 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
RXRBP28702 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.39□□□□□ -1.71
RXRBP28702 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RXRBP28702 AC000403.1-201ENST00000613696 3585 ntBASIC4.39□□□□□ -1.71
RXRBP28702 RNU6-222P-201ENST00000362438 107 ntBASIC4.39□□□□□ -1.71
RXRBP28702 Y_RNA.123-201ENST00000363338 102 ntBASIC4.39□□□□□ -1.71
RXRBP28702 RNU6-318P-201ENST00000384283 103 ntBASIC4.39□□□□□ -1.71
RXRBP28702 Y_RNA.623-201ENST00000411128 95 ntBASIC4.39□□□□□ -1.71
RXRBP28702 AC244098.2-201ENST00000422068 99 ntBASIC4.39□□□□□ -1.71
RXRBP28702 FABP5P15-201ENST00000453566 214 ntBASIC4.39□□□□□ -1.71
RXRBP28702 SNORD108-201ENST00000459332 71 ntBASIC4.39□□□□□ -1.71
RXRBP28702 TOMM22P6-201ENST00000465035 409 ntBASIC4.39□□□□□ -1.71
RXRBP28702 AK3P2-201ENST00000507976 429 ntBASIC4.39□□□□□ -1.71
RXRBP28702 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.39□□□□□ -1.71
RXRBP28702 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.39□□□□□ -1.71
RXRBP28702 AC010928.2-201ENST00000588017 287 ntBASIC4.39□□□□□ -1.71
RXRBP28702 AC008121.1-201ENST00000603244 268 ntBASIC4.39□□□□□ -1.71
RXRBP28702 AC104465.1-201ENST00000611365 139 ntBASIC4.39□□□□□ -1.71
RXRBP28702 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RXRBP28702 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RXRBP28702 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRBP28702 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.38□□□□□ -1.71
RXRBP28702 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
RXRBP28702 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRBP28702 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRBP28702 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRBP28702 Y_RNA.8-201ENST00000362353 102 ntBASIC4.38□□□□□ -1.71
RXRBP28702 RNU6-1290P-201ENST00000362957 109 ntBASIC4.38□□□□□ -1.71
RXRBP28702 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRBP28702 RNA5SP213-201ENST00000391031 106 ntBASIC4.38□□□□□ -1.71
RXRBP28702 AL033519.2-201ENST00000403958 392 ntBASIC4.38□□□□□ -1.71
RXRBP28702 RPL21P40-201ENST00000428586 483 ntBASIC4.38□□□□□ -1.71
RXRBP28702 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.38□□□□□ -1.71
RXRBP28702 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.38□□□□□ -1.71
RXRBP28702 AC005002.2-201ENST00000438228 269 ntBASIC4.38□□□□□ -1.71
RXRBP28702 RN7SL594P-201ENST00000470590 287 ntBASIC4.38□□□□□ -1.71
RXRBP28702 RNU6-143P-201ENST00000516942 93 ntBASIC4.38□□□□□ -1.71
RXRBP28702 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRBP28702 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
RXRBP28702 AC020914.4-201ENST00000597690 277 ntBASIC4.38□□□□□ -1.71
RXRBP28702 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.38□□□□□ -1.71
RXRBP28702 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RXRBP28702 BX322639.1-202ENST00000423987 2213 ntBASIC4.38□□□□□ -1.71
RXRBP28702 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
RXRBP28702 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
RXRBP28702 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RXRBP28702 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RXRBP28702 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RXRBP28702 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RXRBP28702 Y_RNA.275-201ENST00000364726 110 ntBASIC4.37□□□□□ -1.71
RXRBP28702 HLFP1-201ENST00000402375 499 ntBASIC4.37□□□□□ -1.71
RXRBP28702 RNU2-51P-201ENST00000410708 197 ntBASIC4.37□□□□□ -1.71
RXRBP28702 RPL19P1-201ENST00000411635 428 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms