Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MTCO1P19-201ENST00000443487 500 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A3P25940 CECR9-201ENST00000453421 199 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A3P25940 MTCO2P29-201ENST00000465212 189 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC107626.1-201ENST00000471084 183 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.21□□□□□ -2.22
COL5A3P25940 AC010424.1-201ENST00000506336 297 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 RNU6-927P-201ENST00000516199 100 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 RNU6-572P-201ENST00000516724 80 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 SNORA18.6-201ENST00000516792 115 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 RNU2-46P-201ENST00000517038 113 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 MTCO2P4-201ENST00000517968 247 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.21□□□□□ -2.22
COL5A3P25940 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.21□□□□□ -2.22
COL5A3P25940 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A3P25940 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.21□□□□□ -2.22
COL5A3P25940 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.21□□□□□ -2.22
COL5A3P25940 NBR2-204ENST00000587322 63 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC245014.2-201ENST00000603689 287 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC064872.1-201ENST00000604823 1072 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC246785.4-201ENST00000605374 287 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AL020996.3-201ENST00000606617 222 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AP002360.4-201ENST00000606980 481 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC104073.3-201ENST00000610942 955 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC091304.9-201ENST00000612091 226 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 Z99129.1-201ENST00000612510 255 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 MTND5P42-201ENST00000637720 498 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 AC099654.13-201ENST00000639774 207 ntBASIC1.21□□□□□ -2.22
COL5A3P25940 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.21□□□□□ -2.22
COL5A3P25940 RNU6-778P-201ENST00000363269 103 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RNU6-371P-201ENST00000364283 108 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RNU6-512P-201ENST00000364438 103 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
COL5A3P25940 RNU6-220P-201ENST00000390919 107 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RPS3AP36-201ENST00000398190 775 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RNU2-36P-201ENST00000410361 191 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AL596276.1-201ENST00000434465 418 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC073614.1-201ENST00000438690 650 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.2□□□□□ -2.22
COL5A3P25940 MTCYBP1-201ENST00000454315 1119 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 MTND1P12-201ENST00000455231 147 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 MTCO2P18-201ENST00000457151 658 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RNU6-1132P-201ENST00000459214 107 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RPL37P6-201ENST00000460682 294 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RAP1BP2-201ENST00000478270 544 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC092989.1-201ENST00000481235 277 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC079140.3-201ENST00000511111 550 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RNA5SP330-201ENST00000517096 96 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 CBX3P8-201ENST00000532412 525 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 CBX3P7-201ENST00000532876 502 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AP002453.2-201ENST00000533503 320 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC087883.1-201ENST00000551882 391 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 OR1M4P-201ENST00000589199 287 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC005261.5-201ENST00000596280 355 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC110760.3-201ENST00000598794 467 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC025165.5-201ENST00000602802 578 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC073648.5-201ENST00000603502 305 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 FAM71BP1-201ENST00000604431 523 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 Y_RNA.159-201ENST00000363674 87 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 Y_RNA.201-201ENST00000364052 96 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
COL5A3P25940 RNU6-39P-201ENST00000384344 107 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 DEFB108C-201ENST00000400154 252 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 NDUFS5P1-201ENST00000405668 289 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RN7SKP158-201ENST00000410453 326 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RN7SKP200-201ENST00000410564 320 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC010153.1-201ENST00000432862 727 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 MTND4P32-201ENST00000437189 1237 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC013267.1-201ENST00000458227 267 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC139453.3-201ENST00000493276 369 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC105313.1-201ENST00000509121 353 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC105417.1-201ENST00000514691 285 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 RNU6-703P-201ENST00000516946 107 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 AC022616.3-201ENST00000523940 148 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC010186.2-204ENST00000537668 439 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC021739.1-201ENST00000559631 174 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.2□□□□□ -2.22
COL5A3P25940 MIR1273C-201ENST00000578669 77 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC005034.5-201ENST00000604219 466 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 U6.42-201ENST00000618440 107 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AC009161.2-201ENST00000624626 138 ntBASIC1.2□□□□□ -2.22
COL5A3P25940 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.19□□□□□ -2.22
COL5A3P25940 MTND5P30-201ENST00000452896 1731 ntBASIC1.19□□□□□ -2.22
COL5A3P25940 AL359854.1-201ENST00000614203 1594 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms