Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL136221.1-201ENST00000621449 509 ntBASIC2.41□□□□□ -2.02
BDNFP23560 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BDNFP23560 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
BDNFP23560 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
BDNFP23560 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
BDNFP23560 RNU4-15P-201ENST00000362613 141 ntBASIC2.4□□□□□ -2.03
BDNFP23560 SNORD32B-201ENST00000364460 84 ntBASIC2.4□□□□□ -2.03
BDNFP23560 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
BDNFP23560 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 Y_RNA.582-201ENST00000391023 95 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AL591416.1-201ENST00000404015 867 ntBASIC2.4□□□□□ -2.03
BDNFP23560 MTCYBP2-201ENST00000407745 171 ntBASIC2.4□□□□□ -2.03
BDNFP23560 MIR1283-2-201ENST00000408621 87 ntBASIC2.4□□□□□ -2.03
BDNFP23560 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AL135786.1-201ENST00000415892 214 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AL139415.2-201ENST00000431968 163 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 RNU7-138P-201ENST00000459479 64 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AC090255.1-201ENST00000495779 349 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 RNA5SP490-201ENST00000517141 136 ntBASIC2.4□□□□□ -2.03
BDNFP23560 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.4□□□□□ -2.03
BDNFP23560 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 AC087683.1-201ENST00000591187 441 ntBASIC2.4□□□□□ -2.03
BDNFP23560 RNU6-85P-201ENST00000605989 107 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.4□□□□□ -2.03
BDNFP23560 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
BDNFP23560 AC073534.2-201ENST00000620377 381 ntBASIC2.4□□□□□ -2.03
BDNFP23560 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.4□□□□□ -2.03
BDNFP23560 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
BDNFP23560 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
BDNFP23560 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
BDNFP23560 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
BDNFP23560 CENPCP1-201ENST00000533085 2578 ntBASIC2.39□□□□□ -2.03
BDNFP23560 Y_RNA.255-201ENST00000364581 97 ntBASIC2.39□□□□□ -2.03
BDNFP23560 OR5H15-201ENST00000383696 930 ntBASIC2.39□□□□□ -2.03
BDNFP23560 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
BDNFP23560 SNORD37.1-201ENST00000390968 65 ntBASIC2.39□□□□□ -2.03
BDNFP23560 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
BDNFP23560 MTCYBP8-201ENST00000422855 651 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.39□□□□□ -2.03
BDNFP23560 AC073415.1-201ENST00000449240 153 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AL353705.4-201ENST00000449661 238 ntBASIC2.39□□□□□ -2.03
BDNFP23560 RNU7-180P-201ENST00000459240 63 ntBASIC2.39□□□□□ -2.03
BDNFP23560 RNA5SP57-201ENST00000459463 123 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.39□□□□□ -2.03
BDNFP23560 RNU6-991P-201ENST00000516168 107 ntBASIC2.39□□□□□ -2.03
BDNFP23560 Y_RNA.688-201ENST00000516565 95 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AP005660.1-201ENST00000522972 293 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AC103996.1-201ENST00000555468 102 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AL158211.1-201ENST00000566763 763 ntBASIC2.39□□□□□ -2.03
BDNFP23560 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
BDNFP23560 AC090582.1-201ENST00000636321 199 ntBASIC2.39□□□□□ -2.03
BDNFP23560 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
BDNFP23560 CBX3P1-201ENST00000325243 554 ntBASIC2.38□□□□□ -2.03
BDNFP23560 RNU6-23P-201ENST00000363283 107 ntBASIC2.38□□□□□ -2.03
BDNFP23560 U3.9-201ENST00000363823 204 ntBASIC2.38□□□□□ -2.03
BDNFP23560 Y_RNA.481-201ENST00000384373 102 ntBASIC2.38□□□□□ -2.03
BDNFP23560 SNORA26.3-201ENST00000391119 136 ntBASIC2.38□□□□□ -2.03
BDNFP23560 CDK8P2-201ENST00000415020 547 ntBASIC2.38□□□□□ -2.03
BDNFP23560 RPL23AP95-201ENST00000426806 265 ntBASIC2.38□□□□□ -2.03
BDNFP23560 MTCO2P3-201ENST00000442543 421 ntBASIC2.38□□□□□ -2.03
BDNFP23560 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.38□□□□□ -2.03
BDNFP23560 AC112492.4-201ENST00000456549 352 ntBASIC2.38□□□□□ -2.03
BDNFP23560 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.38□□□□□ -2.03
BDNFP23560 AC108078.1-201ENST00000508073 725 ntBASIC2.38□□□□□ -2.03
BDNFP23560 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.38□□□□□ -2.03
BDNFP23560 HSPE1P18-201ENST00000517602 280 ntBASIC2.38□□□□□ -2.03
BDNFP23560 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.38□□□□□ -2.03
BDNFP23560 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.38□□□□□ -2.03
BDNFP23560 AL078605.1-201ENST00000603529 500 ntBASIC2.38□□□□□ -2.03
BDNFP23560 AC104073.3-201ENST00000610942 955 ntBASIC2.38□□□□□ -2.03
BDNFP23560 AC087241.4-201ENST00000612441 480 ntBASIC2.38□□□□□ -2.03
BDNFP23560 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
BDNFP23560 RNU6-82P-201ENST00000363970 107 ntBASIC2.37□□□□□ -2.03
BDNFP23560 RNU6-1164P-201ENST00000364428 107 ntBASIC2.37□□□□□ -2.03
BDNFP23560 SNORD32A-201ENST00000364805 84 ntBASIC2.37□□□□□ -2.03
BDNFP23560 RNU6-234P-201ENST00000365229 104 ntBASIC2.37□□□□□ -2.03
BDNFP23560 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.37□□□□□ -2.03
BDNFP23560 RNA5SP489-201ENST00000410986 109 ntBASIC2.37□□□□□ -2.03
BDNFP23560 DPH3P2-201ENST00000422618 250 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AL035666.1-201ENST00000446195 348 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.37□□□□□ -2.03
BDNFP23560 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.37□□□□□ -2.03
BDNFP23560 AP005639.2-201ENST00000527592 928 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.37□□□□□ -2.03
BDNFP23560 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.37□□□□□ -2.03
BDNFP23560 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.37□□□□□ -2.03
BDNFP23560 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
BDNFP23560 MIR4713-201ENST00000582691 75 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AC110760.3-201ENST00000598794 467 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AC119751.7-201ENST00000600494 245 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AC025811.1-201ENST00000604312 472 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AP001836.1-201ENST00000604675 523 ntBASIC2.37□□□□□ -2.03
BDNFP23560 AC116312.1-201ENST00000606841 314 ntBASIC2.37□□□□□ -2.03
BDNFP23560 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms