Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RNU6-942P-201ENST00000363002 107 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 Y_RNA.269-201ENST00000364685 89 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 RNU6-290P-201ENST00000365212 101 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 RNU6-142P-201ENST00000384019 107 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 MIR200C-201ENST00000384980 68 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 MIR607-201ENST00000385241 96 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 RPL21P17-201ENST00000397467 475 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AL033519.2-201ENST00000403958 392 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 Y_RNA.602-201ENST00000410535 92 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
NR4A1P22736 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 EIF1P2-201ENST00000428233 350 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AL512844.2-201ENST00000433990 593 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.2□□□□□ -1.9
NR4A1P22736 RPL37P4-201ENST00000448908 268 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.2□□□□□ -1.9
NR4A1P22736 AC093663.1-201ENST00000497190 394 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 RNU1-103P-201ENST00000516502 125 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 SNORA67.7-201ENST00000516664 135 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AC023824.2-201ENST00000566185 400 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.2□□□□□ -1.9
NR4A1P22736 MIR3158-1-201ENST00000583596 81 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AL512605.2-201ENST00000592972 256 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AC024581.2-201ENST00000619986 252 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 AC012442.3-202ENST00000636742 206 ntBASIC3.2□□□□□ -1.9
NR4A1P22736 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
NR4A1P22736 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NR4A1P22736 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR4A1P22736 RNU6-778P-201ENST00000363269 103 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NR4A1P22736 DYNLT3P1-201ENST00000378574 347 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 RNU6-937P-201ENST00000384325 106 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 RNU6-843P-201ENST00000384454 104 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 RNU6-658P-201ENST00000384606 106 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 MIR325-201ENST00000385260 98 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 SNORA48.7-201ENST00000391302 135 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR4A1P22736 MIR1298-201ENST00000408783 112 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 SNORA11-201ENST00000408789 128 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 HMGN2P30-201ENST00000423237 256 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR4A1P22736 RPS15AP7-201ENST00000439294 405 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 AC243964.1-201ENST00000441814 261 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 AP000873.1-201ENST00000463987 400 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 AC023141.12-201ENST00000512399 199 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 RNU6-1114P-201ENST00000516022 107 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 SCARNA24.2-201ENST00000516968 130 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.19□□□□□ -1.9
NR4A1P22736 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
NR4A1P22736 AC006133.1-201ENST00000617106 264 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR4A1P22736 AP000553.6-201ENST00000641242 118 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NR4A1P22736 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.19□□□□□ -1.9
NR4A1P22736 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NR4A1P22736 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR4A1P22736 RNU6-222P-201ENST00000362438 107 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 Y_RNA.83-201ENST00000363005 113 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 Y_RNA.150-201ENST00000363562 102 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RNU6-137P-201ENST00000363680 108 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RNU1-73P-201ENST00000383971 164 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RNU6-886P-201ENST00000384319 105 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 MIR32-201ENST00000384965 70 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 MIR493-201ENST00000385254 89 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 SNORA53-201ENST00000391141 249 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.18□□□□□ -1.9
NR4A1P22736 AC098831.1-201ENST00000440661 216 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
NR4A1P22736 AC087477.1-201ENST00000465747 340 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RPL30P1-201ENST00000488676 339 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RPL21P129-201ENST00000491732 478 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NR4A1P22736 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.18□□□□□ -1.9
NR4A1P22736 H3F3AP1-201ENST00000559984 334 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.18□□□□□ -1.9
NR4A1P22736 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.18□□□□□ -1.9
NR4A1P22736 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.18□□□□□ -1.9
NR4A1P22736 AC127459.3-201ENST00000624328 466 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 AC010733.2-201ENST00000589496 5702 ntBASIC3.18□□□□□ -1.9
NR4A1P22736 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR4A1P22736 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NR4A1P22736 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
NR4A1P22736 RNU6-879P-201ENST00000364328 108 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 RNA5SP51-201ENST00000364750 119 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 RNU6-898P-201ENST00000365627 104 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 AL359837.1-201ENST00000381357 287 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 Y_RNA.464-201ENST00000384282 110 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 RNU6-378P-201ENST00000384324 107 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 RNA5SP213-201ENST00000391031 106 ntBASIC3.17□□□□□ -1.9
NR4A1P22736 MIR888-201ENST00000401186 77 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms