Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 HMGB1P35-201ENST00000503360 598 ntBASIC4.22□□□□□ -1.73
LMNB1P20700 RN7SKP272-201ENST00000516988 232 ntBASIC4.22□□□□□ -1.73
LMNB1P20700 AC090617.3-201ENST00000573670 475 ntBASIC4.22□□□□□ -1.73
LMNB1P20700 MIR3945-201ENST00000581853 98 ntBASIC4.22□□□□□ -1.73
LMNB1P20700 AC011476.5-201ENST00000615594 130 ntBASIC4.22□□□□□ -1.73
LMNB1P20700 U6.104-201ENST00000637979 90 ntBASIC4.22□□□□□ -1.73
LMNB1P20700 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LMNB1P20700 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMNB1P20700 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LMNB1P20700 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LMNB1P20700 Y_RNA.143-201ENST00000363520 106 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 Y_RNA.237-201ENST00000364439 102 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 RNU6-1286P-201ENST00000383871 107 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 RNU6-17P-201ENST00000384245 107 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 RNU6-18P-201ENST00000384527 107 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 Y_RNA.539-201ENST00000384635 107 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 MIR888-201ENST00000401186 77 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 AL079342.1-201ENST00000401460 267 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 HLFP1-201ENST00000402375 499 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 RN7SKP53-201ENST00000411337 315 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 AC007969.2-201ENST00000441891 191 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.21□□□□□ -1.74
LMNB1P20700 RPL37P4-201ENST00000448908 268 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 BTF3L4P4-201ENST00000506381 449 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 Y_RNA.713-201ENST00000517013 96 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 AC023824.2-201ENST00000566185 400 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.21□□□□□ -1.74
LMNB1P20700 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.21□□□□□ -1.74
LMNB1P20700 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.21□□□□□ -1.74
LMNB1P20700 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.21□□□□□ -1.74
LMNB1P20700 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMNB1P20700 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMNB1P20700 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMNB1P20700 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMNB1P20700 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.21□□□□□ -1.74
LMNB1P20700 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.21□□□□□ -1.74
LMNB1P20700 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMNB1P20700 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LMNB1P20700 AC007656.2-201ENST00000624902 4547 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMNB1P20700 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LMNB1P20700 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
LMNB1P20700 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.2□□□□□ -1.74
LMNB1P20700 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMNB1P20700 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LMNB1P20700 Y_RNA.16-201ENST00000362421 102 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 SNORD56.1-201ENST00000362913 68 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 Y_RNA.439-201ENST00000384119 94 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AL139095.1-201ENST00000404326 391 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AC099548.1-201ENST00000421443 426 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 TMEM167AP1-201ENST00000423409 219 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AL591043.1-201ENST00000432461 424 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AL353705.4-201ENST00000449661 238 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.2□□□□□ -1.74
LMNB1P20700 RPS26P21-201ENST00000475397 348 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 RNU6-1012P-201ENST00000516606 109 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AC022868.1-201ENST00000517767 391 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AC093023.1-201ENST00000547375 507 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 MIR376A1-201ENST00000616574 68 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AF117829.1-206ENST00000621883 3802 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AL136164.4-201ENST00000625013 2135 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 AL137790.1-201ENST00000634283 177 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMNB1P20700 AC022336.2-201ENST00000568966 2538 ntBASIC4.2□□□□□ -1.74
LMNB1P20700 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.2□□□□□ -1.74
LMNB1P20700 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LMNB1P20700 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LMNB1P20700 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMNB1P20700 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
LMNB1P20700 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
LMNB1P20700 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMNB1P20700 MIR32-201ENST00000384965 70 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 MIR487A-201ENST00000385009 80 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 HMGN2P8-201ENST00000391458 268 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMNB1P20700 AP000567.1-201ENST00000406413 156 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 AL159169.1-201ENST00000421119 127 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.19□□□□□ -1.74
LMNB1P20700 MRPL42P6-201ENST00000486397 371 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 TRBV12-2-201ENST00000489763 344 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 RNU6-581P-201ENST00000516214 105 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 RNU6-579P-201ENST00000516879 102 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 AC091144.1-201ENST00000519573 138 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.19□□□□□ -1.74
LMNB1P20700 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.19□□□□□ -1.74
LMNB1P20700 AC240442.1-201ENST00000616055 283 ntBASIC4.19□□□□□ -1.74
LMNB1P20700 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.19□□□□□ -1.74
LMNB1P20700 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LMNB1P20700 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
LMNB1P20700 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
LMNB1P20700 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LMNB1P20700 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LMNB1P20700 SNORD27-201ENST00000363981 72 ntBASIC4.18□□□□□ -1.74
LMNB1P20700 SNORA29-201ENST00000384183 140 ntBASIC4.18□□□□□ -1.74
LMNB1P20700 RNU6-318P-201ENST00000384283 103 ntBASIC4.18□□□□□ -1.74
LMNB1P20700 RNU6-1035P-201ENST00000384477 107 ntBASIC4.18□□□□□ -1.74
LMNB1P20700 RNA5SP213-201ENST00000391031 106 ntBASIC4.18□□□□□ -1.74
LMNB1P20700 RNU2-14P-201ENST00000411053 191 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms