Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC007179.3-201ENST00000604976 235 ntBASIC3.81□□□□□ -1.8
ATP2B1P20020 AC100812.1-201ENST00000607622 580 ntBASIC3.81□□□□□ -1.8
ATP2B1P20020 AC083806.3-201ENST00000614016 455 ntBASIC3.81□□□□□ -1.8
ATP2B1P20020 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.81□□□□□ -1.8
ATP2B1P20020 AC137590.2-201ENST00000619709 240 ntBASIC3.81□□□□□ -1.8
ATP2B1P20020 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.81□□□□□ -1.8
ATP2B1P20020 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ATP2B1P20020 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATP2B1P20020 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2B1P20020 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2B1P20020 RNU6-1210P-201ENST00000363775 107 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 RNA5SP72-201ENST00000364442 117 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 SNORA68.1-201ENST00000364537 132 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2B1P20020 Y_RNA.496-201ENST00000384444 101 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2B1P20020 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2B1P20020 AIMP1P2-201ENST00000425294 312 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 MTCO3P29-201ENST00000432119 779 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.8□□□□□ -1.8
ATP2B1P20020 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2B1P20020 HMGB1P35-201ENST00000503360 598 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 RNU2-53P-201ENST00000516257 147 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 Y_RNA.706-201ENST00000516933 99 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2B1P20020 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.8□□□□□ -1.8
ATP2B1P20020 AC010928.2-201ENST00000588017 287 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 AC010620.2-201ENST00000600135 313 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.8□□□□□ -1.8
ATP2B1P20020 MIR1244-1-201ENST00000612829 85 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 MIR1244-3-201ENST00000635744 85 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 MIR1244-2-201ENST00000636449 85 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 MIR1244-4-202ENST00000636813 85 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 AL049781.1-201ENST00000623195 3585 ntBASIC3.8□□□□□ -1.8
ATP2B1P20020 AC010329.5-201ENST00000623497 2174 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 RNU1-70P-201ENST00000362618 164 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 RNU6-1159P-201ENST00000362933 107 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 RNU1-115P-201ENST00000365329 160 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 RN7SKP111-201ENST00000410349 271 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 MCFD2P1-201ENST00000417812 300 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 AC012306.1-201ENST00000423267 114 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 EIF4EP4-201ENST00000424916 578 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 RPL23AP58-201ENST00000440453 469 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.79□□□□□ -1.8
ATP2B1P20020 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2B1P20020 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B1P20020 RN7SKP272-201ENST00000516988 232 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.79□□□□□ -1.8
ATP2B1P20020 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2B1P20020 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B1P20020 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.79□□□□□ -1.8
ATP2B1P20020 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B1P20020 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2B1P20020 MIR4276-201ENST00000584832 70 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 AC092447.9-201ENST00000603395 144 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 AC016925.2-201ENST00000605108 242 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 RMST_6.1-201ENST00000611980 203 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 uc_338.1-201ENST00000612113 180 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
ATP2B1P20020 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2B1P20020 AC017071.1-201ENST00000564407 2204 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 SNORD115-32-201ENST00000364079 82 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 DYNLT3P1-201ENST00000378574 347 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 RNY1P14-201ENST00000384426 108 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 MIR32-201ENST00000384965 70 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATP2B1P20020 MIR190B-201ENST00000401119 79 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B1P20020 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 MTND4P19-201ENST00000446659 478 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2B1P20020 HMGN1P18-201ENST00000457642 277 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC008155.2-201ENST00000464337 397 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AL121594.1-201ENST00000475906 575 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC006483.1-201ENST00000487308 313 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 SNORA25.10-201ENST00000515926 124 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC144568.1-201ENST00000520139 137 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AL078605.1-201ENST00000603529 500 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 Z98751.3-201ENST00000604447 521 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AL161756.2-201ENST00000604597 246 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2B1P20020 AC007485.1-201ENST00000616755 206 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC091903.1-201ENST00000624322 454 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 AC093010.3-201ENST00000570269 15214 ntBASIC3.78□□□□□ -1.8
ATP2B1P20020 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
ATP2B1P20020 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATP2B1P20020 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.77□□□□□ -1.81
ATP2B1P20020 MIR148B-201ENST00000362252 99 ntBASIC3.77□□□□□ -1.81
ATP2B1P20020 RNU1-33P-201ENST00000364249 162 ntBASIC3.77□□□□□ -1.81
ATP2B1P20020 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.77□□□□□ -1.81
ATP2B1P20020 CBX3P9-201ENST00000402326 552 ntBASIC3.77□□□□□ -1.81
ATP2B1P20020 RNU6-1328P-201ENST00000410938 106 ntBASIC3.77□□□□□ -1.81
ATP2B1P20020 MICF-203ENST00000432679 129 ntBASIC3.77□□□□□ -1.81
ATP2B1P20020 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.77□□□□□ -1.81
ATP2B1P20020 GSTA11P-201ENST00000452866 669 ntBASIC3.77□□□□□ -1.81
ATP2B1P20020 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.77□□□□□ -1.81
ATP2B1P20020 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.77□□□□□ -1.81
ATP2B1P20020 MIR3923-201ENST00000579521 83 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms