Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC3P19447 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC3P19447 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC3P19447 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC3P19447 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC3P19447 Y_RNA.176-201ENST00000363815 109 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RNU6-196P-201ENST00000384315 107 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RNU1-57P-201ENST00000384491 166 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RNU6-1093P-201ENST00000391194 107 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 HMGN2P8-201ENST00000391458 268 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RPL21P75-201ENST00000396599 483 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RPL21P28-201ENST00000401418 483 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 HMGB3P2-201ENST00000411913 584 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AL590556.1-201ENST00000423231 483 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 TRIAP1P1-201ENST00000427062 225 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC3P19447 RPS29P12-201ENST00000460178 152 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.19□□□□□ -1.74
ERCC3P19447 RPL21P39-201ENST00000463605 483 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC008155.2-201ENST00000464337 397 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC087190.1-201ENST00000484462 480 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC107032.1-201ENST00000485945 480 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC132942.1-201ENST00000486753 483 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC093591.1-201ENST00000491435 481 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RPL21P16-201ENST00000495531 483 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC3P19447 SCARNA17.1-201ENST00000516211 143 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 SCARNA17.2-201ENST00000516334 143 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 RNU6-911P-201ENST00000516523 104 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.19□□□□□ -1.74
ERCC3P19447 MIR5695-201ENST00000579717 85 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AC008739.2-201ENST00000597006 317 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 AL670379.2-201ENST00000604983 252 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 SCARNA17.4-201ENST00000614296 143 ntBASIC4.19□□□□□ -1.74
ERCC3P19447 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
ERCC3P19447 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC3P19447 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ERCC3P19447 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC3P19447 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ERCC3P19447 Y_RNA.40-201ENST00000362645 93 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 RNU6-655P-201ENST00000362858 107 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 Y_RNA.149-201ENST00000363558 117 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 Y_RNA.380-201ENST00000365663 111 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 Y_RNA.471-201ENST00000384312 102 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 U3.26-201ENST00000391236 204 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AC097463.2-201ENST00000421074 142 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 WARS2P1-201ENST00000429678 537 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.18□□□□□ -1.74
ERCC3P19447 RPL23AP22-201ENST00000437556 453 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC3P19447 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.18□□□□□ -1.74
ERCC3P19447 HMGB1P35-201ENST00000503360 598 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC3P19447 AC110794.1-201ENST00000505816 425 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AC026784.1-201ENST00000507986 352 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AP002404.1-201ENST00000532005 451 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 MIR3923-201ENST00000579521 83 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AL078605.1-201ENST00000603529 500 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AL034555.1-201ENST00000604816 211 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.18□□□□□ -1.74
ERCC3P19447 AC005296.1-201ENST00000616145 209 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AL159153.1-201ENST00000619688 317 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 MIR3651-201ENST00000630427 90 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 AL450472.1-202ENST00000637286 180 ntBASIC4.18□□□□□ -1.74
ERCC3P19447 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC3P19447 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC3P19447 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.18□□□□□ -1.74
ERCC3P19447 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ERCC3P19447 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.17□□□□□ -1.74
ERCC3P19447 OR56A5-201ENST00000340110 738 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 Y_RNA.133-201ENST00000363428 110 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 MIR1252-201ENST00000408861 65 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.17□□□□□ -1.74
ERCC3P19447 RBMY2UP-201ENST00000453474 324 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 RPL27AP5-201ENST00000469428 449 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 RN7SL601P-201ENST00000471221 293 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 AC093852.1-201ENST00000503587 266 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 RNU2-53P-201ENST00000516257 147 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ERCC3P19447 UBL5P4-201ENST00000562584 236 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 AC011471.1-201ENST00000585766 187 ntBASIC4.17□□□□□ -1.74
ERCC3P19447 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.17□□□□□ -1.74
ERCC3P19447 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ERCC3P19447 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.17□□□□□ -1.74
ERCC3P19447 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ERCC3P19447 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ERCC3P19447 snoU2_19.1-201ENST00000362361 80 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 Y_RNA.47-201ENST00000362697 108 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 RNU1-33P-201ENST00000364249 162 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 RNU6-1083P-201ENST00000384022 107 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 RNU6-574P-201ENST00000384265 107 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 MIR1302-3-201ENST00000408128 138 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms