Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AF186996.7-201ENST00000492781 209 ntBASIC4.22□□□□□ -1.73
LIG1P18858 SNORD59.2-201ENST00000516873 68 ntBASIC4.22□□□□□ -1.73
LIG1P18858 AC087499.8-201ENST00000578406 226 ntBASIC4.22□□□□□ -1.73
LIG1P18858 AC037487.3-201ENST00000606668 112 ntBASIC4.22□□□□□ -1.73
LIG1P18858 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LIG1P18858 AL021368.2-201ENST00000606125 5352 ntBASIC4.22□□□□□ -1.73
LIG1P18858 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LIG1P18858 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.21□□□□□ -1.73
LIG1P18858 RNU6-137P-201ENST00000363680 108 ntBASIC4.21□□□□□ -1.74
LIG1P18858 RNA5SP42-201ENST00000364278 115 ntBASIC4.21□□□□□ -1.74
LIG1P18858 Y_RNA.286-201ENST00000364813 102 ntBASIC4.21□□□□□ -1.74
LIG1P18858 SNORD113-1-201ENST00000365321 69 ntBASIC4.21□□□□□ -1.74
LIG1P18858 RNA5SP424-201ENST00000390988 115 ntBASIC4.21□□□□□ -1.74
LIG1P18858 SNORD12B-201ENST00000410433 91 ntBASIC4.21□□□□□ -1.74
LIG1P18858 RNA5SP44-201ENST00000410446 133 ntBASIC4.21□□□□□ -1.74
LIG1P18858 RNU6-1077P-201ENST00000410506 102 ntBASIC4.21□□□□□ -1.74
LIG1P18858 MTATP6P29-201ENST00000415057 132 ntBASIC4.21□□□□□ -1.74
LIG1P18858 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.21□□□□□ -1.74
LIG1P18858 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.21□□□□□ -1.74
LIG1P18858 AC087477.1-201ENST00000465747 340 ntBASIC4.21□□□□□ -1.74
LIG1P18858 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.21□□□□□ -1.74
LIG1P18858 RN7SKP49-201ENST00000516675 260 ntBASIC4.21□□□□□ -1.74
LIG1P18858 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.21□□□□□ -1.74
LIG1P18858 AC072026.1-201ENST00000605023 201 ntBASIC4.21□□□□□ -1.74
LIG1P18858 U2.21-201ENST00000637295 81 ntBASIC4.21□□□□□ -1.74
LIG1P18858 AC132825.6-201ENST00000638861 357 ntBASIC4.21□□□□□ -1.74
LIG1P18858 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LIG1P18858 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LIG1P18858 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIG1P18858 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.21□□□□□ -1.74
LIG1P18858 MFSD8-236ENST00000641509 4050 ntBASIC4.21□□□□□ -1.74
LIG1P18858 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.21□□□□□ -1.74
LIG1P18858 AC007656.2-201ENST00000624902 4547 ntBASIC4.2□□□□□ -1.74
LIG1P18858 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIG1P18858 RNU6-740P-201ENST00000364734 105 ntBASIC4.2□□□□□ -1.74
LIG1P18858 SNORD32A-201ENST00000364805 84 ntBASIC4.2□□□□□ -1.74
LIG1P18858 Y_RNA.292-201ENST00000364904 97 ntBASIC4.2□□□□□ -1.74
LIG1P18858 Y_RNA.569-201ENST00000384749 103 ntBASIC4.2□□□□□ -1.74
LIG1P18858 RNU6ATAC-201ENST00000408749 126 ntBASIC4.2□□□□□ -1.74
LIG1P18858 AL139247.1-201ENST00000422768 325 ntBASIC4.2□□□□□ -1.74
LIG1P18858 RPL23AP95-201ENST00000426806 265 ntBASIC4.2□□□□□ -1.74
LIG1P18858 MTCO1P5-201ENST00000433573 344 ntBASIC4.2□□□□□ -1.74
LIG1P18858 GOT2P5-201ENST00000433995 546 ntBASIC4.2□□□□□ -1.74
LIG1P18858 AC098831.1-201ENST00000440661 216 ntBASIC4.2□□□□□ -1.74
LIG1P18858 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.2□□□□□ -1.74
LIG1P18858 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.2□□□□□ -1.74
LIG1P18858 RNU6-1282P-201ENST00000516735 96 ntBASIC4.2□□□□□ -1.74
LIG1P18858 RNU6-861P-201ENST00000516745 106 ntBASIC4.2□□□□□ -1.74
LIG1P18858 MIR4282-201ENST00000583613 67 ntBASIC4.2□□□□□ -1.74
LIG1P18858 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.2□□□□□ -1.74
LIG1P18858 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.2□□□□□ -1.74
LIG1P18858 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.2□□□□□ -1.74
LIG1P18858 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LIG1P18858 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.19□□□□□ -1.74
LIG1P18858 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.19□□□□□ -1.74
LIG1P18858 FTLP6-201ENST00000355274 422 ntBASIC4.19□□□□□ -1.74
LIG1P18858 RNA5SP124-201ENST00000362739 110 ntBASIC4.19□□□□□ -1.74
LIG1P18858 SNORA29-201ENST00000384183 140 ntBASIC4.19□□□□□ -1.74
LIG1P18858 RNU6-493P-201ENST00000391321 108 ntBASIC4.19□□□□□ -1.74
LIG1P18858 UBA52P6-201ENST00000399822 382 ntBASIC4.19□□□□□ -1.74
LIG1P18858 RNU6-1245P-201ENST00000411130 106 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.19□□□□□ -1.74
LIG1P18858 RNA5SP310-201ENST00000459084 116 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AC073901.1-201ENST00000462471 408 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AC084357.1-201ENST00000473404 255 ntBASIC4.19□□□□□ -1.74
LIG1P18858 RPL26P26-201ENST00000480251 434 ntBASIC4.19□□□□□ -1.74
LIG1P18858 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.19□□□□□ -1.74
LIG1P18858 AC027288.2-201ENST00000553028 243 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.19□□□□□ -1.74
LIG1P18858 AL133393.1-201ENST00000603277 287 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AC011921.3-201ENST00000605540 361 ntBASIC4.19□□□□□ -1.74
LIG1P18858 FTX_3.1-201ENST00000610451 147 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AL121772.2-201ENST00000614331 297 ntBASIC4.19□□□□□ -1.74
LIG1P18858 AC024581.2-201ENST00000619986 252 ntBASIC4.19□□□□□ -1.74
LIG1P18858 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.19□□□□□ -1.74
LIG1P18858 CR392039.5-201ENST00000623201 510 ntBASIC4.19□□□□□ -1.74
LIG1P18858 CEP170P1-201ENST00000502249 4587 ntBASIC4.19□□□□□ -1.74
LIG1P18858 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LIG1P18858 AC110774.1-201ENST00000623567 2018 ntBASIC4.19□□□□□ -1.74
LIG1P18858 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.19□□□□□ -1.74
LIG1P18858 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIG1P18858 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.18□□□□□ -1.74
LIG1P18858 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.18□□□□□ -1.74
LIG1P18858 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.18□□□□□ -1.74
LIG1P18858 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIG1P18858 RNU6-1159P-201ENST00000362933 107 ntBASIC4.18□□□□□ -1.74
LIG1P18858 RNU5B-2P-201ENST00000363036 113 ntBASIC4.18□□□□□ -1.74
LIG1P18858 RNU6-1020P-201ENST00000363684 107 ntBASIC4.18□□□□□ -1.74
LIG1P18858 Y_RNA.275-201ENST00000364726 110 ntBASIC4.18□□□□□ -1.74
LIG1P18858 RNU6-142P-201ENST00000384019 107 ntBASIC4.18□□□□□ -1.74
LIG1P18858 RNU6-217P-201ENST00000384164 104 ntBASIC4.18□□□□□ -1.74
LIG1P18858 RNU6-281P-201ENST00000384212 103 ntBASIC4.18□□□□□ -1.74
LIG1P18858 RNU6-541P-201ENST00000384709 110 ntBASIC4.18□□□□□ -1.74
LIG1P18858 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LIG1P18858 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.18□□□□□ -1.74
LIG1P18858 AL591419.1-201ENST00000427423 339 ntBASIC4.18□□□□□ -1.74
LIG1P18858 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.18□□□□□ -1.74
LIG1P18858 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.18□□□□□ -1.74
LIG1P18858 AC091874.1-201ENST00000511402 339 ntBASIC4.18□□□□□ -1.74
LIG1P18858 SNORD116-28-201ENST00000516123 91 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms