Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 YWHAEP7-203ENST00000622054 312 ntBASIC2.1□□□□□ -2.07
VCLP18206 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.07
VCLP18206 Y_RNA.51-201ENST00000362725 102 ntBASIC2.09□□□□□ -2.07
VCLP18206 RNU6-1159P-201ENST00000362933 107 ntBASIC2.09□□□□□ -2.07
VCLP18206 RNU6-827P-201ENST00000365553 106 ntBASIC2.09□□□□□ -2.07
VCLP18206 Y_RNA.381-201ENST00000365666 102 ntBASIC2.09□□□□□ -2.07
VCLP18206 Y_RNA.481-201ENST00000384373 102 ntBASIC2.09□□□□□ -2.07
VCLP18206 SNORA46.1-201ENST00000391069 153 ntBASIC2.09□□□□□ -2.07
VCLP18206 RPS29P13-201ENST00000402041 169 ntBASIC2.09□□□□□ -2.07
VCLP18206 AL117339.3-201ENST00000418733 162 ntBASIC2.09□□□□□ -2.07
VCLP18206 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.09□□□□□ -2.07
VCLP18206 CBX3P6-201ENST00000430257 527 ntBASIC2.09□□□□□ -2.07
VCLP18206 AL121601.2-201ENST00000438019 707 ntBASIC2.09□□□□□ -2.07
VCLP18206 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.09□□□□□ -2.07
VCLP18206 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VCLP18206 AC027807.1-201ENST00000559921 996 ntBASIC2.09□□□□□ -2.07
VCLP18206 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.09□□□□□ -2.07
VCLP18206 AP005136.1-201ENST00000579765 429 ntBASIC2.09□□□□□ -2.07
VCLP18206 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
VCLP18206 MIR3136-201ENST00000583498 78 ntBASIC2.09□□□□□ -2.07
VCLP18206 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.09□□□□□ -2.07
VCLP18206 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.09□□□□□ -2.07
VCLP18206 AL356157.2-201ENST00000605122 111 ntBASIC2.09□□□□□ -2.07
VCLP18206 RNU6-85P-201ENST00000605989 107 ntBASIC2.09□□□□□ -2.07
VCLP18206 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
VCLP18206 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
VCLP18206 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCLP18206 SNORA16B-201ENST00000364674 135 ntBASIC2.08□□□□□ -2.08
VCLP18206 RNU4-56P-201ENST00000364700 142 ntBASIC2.08□□□□□ -2.08
VCLP18206 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
VCLP18206 RNU6-43P-201ENST00000384302 107 ntBASIC2.08□□□□□ -2.08
VCLP18206 RNU6-692P-201ENST00000384496 107 ntBASIC2.08□□□□□ -2.08
VCLP18206 RN7SKP32-201ENST00000410167 303 ntBASIC2.08□□□□□ -2.08
VCLP18206 RNU2-48P-201ENST00000410694 191 ntBASIC2.08□□□□□ -2.08
VCLP18206 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
VCLP18206 AC244670.1-201ENST00000436879 112 ntBASIC2.08□□□□□ -2.08
VCLP18206 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.08□□□□□ -2.08
VCLP18206 MTND2P22-201ENST00000444325 1033 ntBASIC2.08□□□□□ -2.08
VCLP18206 Z83846.1-201ENST00000446798 265 ntBASIC2.08□□□□□ -2.08
VCLP18206 AL513124.1-201ENST00000450410 614 ntBASIC2.08□□□□□ -2.08
VCLP18206 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.08□□□□□ -2.08
VCLP18206 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.08□□□□□ -2.08
VCLP18206 RPS29P21-201ENST00000496272 170 ntBASIC2.08□□□□□ -2.08
VCLP18206 HMGB1P35-201ENST00000503360 598 ntBASIC2.08□□□□□ -2.08
VCLP18206 SNORA40.12-201ENST00000516329 111 ntBASIC2.08□□□□□ -2.08
VCLP18206 RNU6-965P-201ENST00000516721 96 ntBASIC2.08□□□□□ -2.08
VCLP18206 AC103996.1-201ENST00000555468 102 ntBASIC2.08□□□□□ -2.08
VCLP18206 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.08□□□□□ -2.08
VCLP18206 AC018889.1-201ENST00000605372 397 ntBASIC2.08□□□□□ -2.08
VCLP18206 AC087241.4-201ENST00000612441 480 ntBASIC2.08□□□□□ -2.08
VCLP18206 HULC.1-201ENST00000612720 240 ntBASIC2.08□□□□□ -2.08
VCLP18206 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.08□□□□□ -2.08
VCLP18206 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
VCLP18206 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCLP18206 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.08□□□□□ -2.08
VCLP18206 AP000560.1-201ENST00000624150 1937 ntBASIC2.07□□□□□ -2.08
VCLP18206 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.07□□□□□ -2.08
VCLP18206 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VCLP18206 RNU6-1322P-201ENST00000364309 107 ntBASIC2.07□□□□□ -2.08
VCLP18206 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
VCLP18206 RNU6-259P-201ENST00000383999 107 ntBASIC2.07□□□□□ -2.08
VCLP18206 MIR29C-201ENST00000385231 88 ntBASIC2.07□□□□□ -2.08
VCLP18206 RNA5SP219-201ENST00000390940 113 ntBASIC2.07□□□□□ -2.08
VCLP18206 AC010975.2-201ENST00000427781 588 ntBASIC2.07□□□□□ -2.08
VCLP18206 RPL7P54-201ENST00000438336 674 ntBASIC2.07□□□□□ -2.08
VCLP18206 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.07□□□□□ -2.08
VCLP18206 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.07□□□□□ -2.08
VCLP18206 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.07□□□□□ -2.08
VCLP18206 MTND1P29-201ENST00000448112 647 ntBASIC2.07□□□□□ -2.08
VCLP18206 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.07□□□□□ -2.08
VCLP18206 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
VCLP18206 IGKV3-31-201ENST00000523109 329 ntBASIC2.07□□□□□ -2.08
VCLP18206 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VCLP18206 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.07□□□□□ -2.08
VCLP18206 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.07□□□□□ -2.08
VCLP18206 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
VCLP18206 AP001330.5-201ENST00000607176 411 ntBASIC2.07□□□□□ -2.08
VCLP18206 Z99129.1-201ENST00000612510 255 ntBASIC2.07□□□□□ -2.08
VCLP18206 AL132822.1-201ENST00000617063 513 ntBASIC2.07□□□□□ -2.08
VCLP18206 AL158209.2-201ENST00000619266 216 ntBASIC2.07□□□□□ -2.08
VCLP18206 MIR6863-201ENST00000636112 90 ntBASIC2.07□□□□□ -2.08
VCLP18206 SNORD98-201ENST00000636377 67 ntBASIC2.07□□□□□ -2.08
VCLP18206 MTND5P26-201ENST00000426018 1752 ntBASIC2.07□□□□□ -2.08
VCLP18206 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.07□□□□□ -2.08
VCLP18206 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
VCLP18206 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.06□□□□□ -2.08
VCLP18206 RNU6-142P-201ENST00000384019 107 ntBASIC2.06□□□□□ -2.08
VCLP18206 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
VCLP18206 MIR518A2-201ENST00000384966 87 ntBASIC2.06□□□□□ -2.08
VCLP18206 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
VCLP18206 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.06□□□□□ -2.08
VCLP18206 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.06□□□□□ -2.08
VCLP18206 AC078809.1-201ENST00000427601 140 ntBASIC2.06□□□□□ -2.08
VCLP18206 IFNA20P-201ENST00000436840 528 ntBASIC2.06□□□□□ -2.08
VCLP18206 DNAJC19P4-201ENST00000440115 345 ntBASIC2.06□□□□□ -2.08
VCLP18206 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.06□□□□□ -2.08
VCLP18206 FDX1P2-201ENST00000450769 375 ntBASIC2.06□□□□□ -2.08
VCLP18206 PRELID3BP1-201ENST00000457142 540 ntBASIC2.06□□□□□ -2.08
VCLP18206 RNU7-138P-201ENST00000459479 64 ntBASIC2.06□□□□□ -2.08
VCLP18206 RNU6-261P-201ENST00000459506 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms