Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HIST1H1DP16402 RNU1-96P-201ENST00000364163 162 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
HIST1H1DP16402 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC011233.1-201ENST00000422812 283 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AL591704.1-201ENST00000432574 275 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC005094.1-201ENST00000440420 368 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 MRPL42P4-201ENST00000453267 443 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.06□□□□□ -2.4
HIST1H1DP16402 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC104563.1-201ENST00000476147 376 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC104982.1-201ENST00000478775 574 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC024589.1-201ENST00000512207 263 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.06□□□□□ -2.4
HIST1H1DP16402 HIGD1AP17-201ENST00000554576 276 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AC025678.1-201ENST00000567861 338 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 AL031281.1-201ENST00000604049 488 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 Z69720.2-201ENST00000624755 279 ntBASIC0.06□□□□□ -2.4
HIST1H1DP16402 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
HIST1H1DP16402 RNU6-534P-201ENST00000364877 106 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 RPL22P18-201ENST00000417197 377 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.05□□□□□ -2.4
HIST1H1DP16402 RPEP5-201ENST00000441137 268 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AC073910.1-201ENST00000445047 438 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 TAF9P1-201ENST00000445421 515 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 TAF9P2-201ENST00000454958 515 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 MTND2P33-201ENST00000506452 1031 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.05□□□□□ -2.4
HIST1H1DP16402 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.05□□□□□ -2.4
HIST1H1DP16402 RNU6-1315P-201ENST00000517187 99 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.05□□□□□ -2.4
HIST1H1DP16402 AC092325.1-201ENST00000566449 554 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AC060771.1-201ENST00000582031 164 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AL513534.2-201ENST00000603836 250 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AL360219.1-201ENST00000610230 366 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AL157770.1-201ENST00000623049 439 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 AL512643.1-201ENST00000635735 524 ntBASIC0.05□□□□□ -2.4
HIST1H1DP16402 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HIST1H1DP16402 RNU6-1284P-201ENST00000363701 100 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 SNORA4.2-201ENST00000365313 147 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 SNORD89-201ENST00000390981 114 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 SNORA16.2-201ENST00000390991 127 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.04□□□□□ -2.4
HIST1H1DP16402 MTCYBP5-201ENST00000423752 1135 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 DPRXP1-201ENST00000426312 460 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 RPL23AP95-201ENST00000426806 265 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.04□□□□□ -2.4
HIST1H1DP16402 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.04□□□□□ -2.4
HIST1H1DP16402 RNU6-1223P-201ENST00000517124 104 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 SLC2A13P1-201ENST00000531560 322 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.04□□□□□ -2.4
HIST1H1DP16402 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.04□□□□□ -2.4
HIST1H1DP16402 AC091135.1-201ENST00000585943 307 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 AL138726.1-201ENST00000614873 333 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 AL159152.1-201ENST00000635019 2587 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 AL589743.1-201ENST00000551932 2712 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 CASC19-280ENST00000642102 1351 ntBASIC0.04□□□□□ -2.4
HIST1H1DP16402 CDR1-202ENST00000625883 1485 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 Y_RNA.534-201ENST00000384599 112 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 RNU6-1025P-201ENST00000410629 104 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 MTCO3P41-201ENST00000414801 328 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 RPS20P10-201ENST00000451209 253 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 RNU7-34P-201ENST00000459394 64 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 RNU7-21P-201ENST00000459430 62 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 AP003355.1-201ENST00000518956 587 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 AC025627.3-201ENST00000582078 182 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 AL136363.2-201ENST00000604173 851 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 AC092354.1-201ENST00000606057 376 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 AP000676.3-201ENST00000623299 569 ntBASIC0.03□□□□□ -2.4
HIST1H1DP16402 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.03□□□□□ -2.4
HIST1H1DP16402 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 SNORA25.9-201ENST00000365087 128 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
HIST1H1DP16402 RNU6-72P-201ENST00000384285 79 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 RNU6-342P-201ENST00000384521 104 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.02□□□□□ -2.41
HIST1H1DP16402 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.02□□□□□ -2.41
HIST1H1DP16402 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.02□□□□□ -2.41
HIST1H1DP16402 DAP3P1-201ENST00000441522 278 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 SNRPEP8-201ENST00000442866 260 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 NFU1P2-201ENST00000448700 469 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.02□□□□□ -2.41
HIST1H1DP16402 MIR449C-201ENST00000516047 92 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 SUMO2P16-201ENST00000519475 264 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.02□□□□□ -2.41
HIST1H1DP16402 AL157871.3-201ENST00000557231 293 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 AC068620.3-201ENST00000602749 560 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 AC100814.1-201ENST00000606963 623 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 GHRLOS.1-201ENST00000610995 70 ntBASIC0.02□□□□□ -2.41
HIST1H1DP16402 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.02□□□□□ -2.41
HIST1H1DP16402 SNORD116-20-201ENST00000384529 92 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms