Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC090525.1-201ENST00000479116 478 ntBASIC4.03□□□□□ -1.76
NID1P14543 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.03□□□□□ -1.76
NID1P14543 PPBPP1-201ENST00000510807 373 ntBASIC4.03□□□□□ -1.76
NID1P14543 AC090142.3-201ENST00000519012 385 ntBASIC4.03□□□□□ -1.76
NID1P14543 IGLV3-26-201ENST00000520756 302 ntBASIC4.03□□□□□ -1.76
NID1P14543 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.03□□□□□ -1.76
NID1P14543 AC009163.5-201ENST00000575421 637 ntBASIC4.03□□□□□ -1.76
NID1P14543 AL591926.4-201ENST00000616895 298 ntBASIC4.03□□□□□ -1.76
NID1P14543 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NID1P14543 AC011944.2-201ENST00000624440 683 ntBASIC4.03□□□□□ -1.76
NID1P14543 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NID1P14543 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NID1P14543 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
NID1P14543 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NID1P14543 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.03□□□□□ -1.76
NID1P14543 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NID1P14543 CENPCP1-201ENST00000533085 2578 ntBASIC4.03□□□□□ -1.77
NID1P14543 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
NID1P14543 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
NID1P14543 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
NID1P14543 SNORA48.7-201ENST00000391302 135 ntBASIC4.02□□□□□ -1.77
NID1P14543 TOMM22P1-201ENST00000418578 312 ntBASIC4.02□□□□□ -1.77
NID1P14543 AL356387.2-201ENST00000422272 243 ntBASIC4.02□□□□□ -1.77
NID1P14543 RNU7-141P-201ENST00000459304 62 ntBASIC4.02□□□□□ -1.77
NID1P14543 IGLVIV-65-201ENST00000517313 360 ntBASIC4.02□□□□□ -1.77
NID1P14543 AC006199.1-201ENST00000548728 219 ntBASIC4.02□□□□□ -1.77
NID1P14543 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NID1P14543 MIR3160-1-201ENST00000577972 85 ntBASIC4.02□□□□□ -1.77
NID1P14543 AC011471.1-201ENST00000585766 187 ntBASIC4.02□□□□□ -1.77
NID1P14543 AL670379.3-201ENST00000605040 251 ntBASIC4.02□□□□□ -1.77
NID1P14543 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.02□□□□□ -1.77
NID1P14543 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.02□□□□□ -1.77
NID1P14543 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.02□□□□□ -1.77
NID1P14543 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.02□□□□□ -1.77
NID1P14543 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.02□□□□□ -1.77
NID1P14543 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NID1P14543 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.02□□□□□ -1.77
NID1P14543 AC106871.1-201ENST00000568324 3102 ntBASIC4.02□□□□□ -1.77
NID1P14543 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NID1P14543 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.02□□□□□ -1.77
NID1P14543 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
NID1P14543 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NID1P14543 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NID1P14543 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NID1P14543 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NID1P14543 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NID1P14543 U3.9-201ENST00000363823 204 ntBASIC4.01□□□□□ -1.77
NID1P14543 SNORA37-201ENST00000384504 129 ntBASIC4.01□□□□□ -1.77
NID1P14543 Y_RNA.584-201ENST00000391090 114 ntBASIC4.01□□□□□ -1.77
NID1P14543 U3.26-201ENST00000391236 204 ntBASIC4.01□□□□□ -1.77
NID1P14543 MIR1302-4-201ENST00000408701 150 ntBASIC4.01□□□□□ -1.77
NID1P14543 RNA5SP390-201ENST00000410191 113 ntBASIC4.01□□□□□ -1.77
NID1P14543 AIMP1P2-201ENST00000425294 312 ntBASIC4.01□□□□□ -1.77
NID1P14543 AC103975.1-201ENST00000482506 483 ntBASIC4.01□□□□□ -1.77
NID1P14543 SNORD33.1-201ENST00000516213 88 ntBASIC4.01□□□□□ -1.77
NID1P14543 AC012468.1-201ENST00000604888 430 ntBASIC4.01□□□□□ -1.77
NID1P14543 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NID1P14543 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.01□□□□□ -1.77
NID1P14543 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.01□□□□□ -1.77
NID1P14543 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
NID1P14543 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.01□□□□□ -1.77
NID1P14543 AL136964.1-201ENST00000622038 2990 ntBASIC4.01□□□□□ -1.77
NID1P14543 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NID1P14543 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.01□□□□□ -1.77
NID1P14543 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4□□□□□ -1.77
NID1P14543 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
NID1P14543 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4□□□□□ -1.77
NID1P14543 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4□□□□□ -1.77
NID1P14543 RNA5SP28-201ENST00000363841 119 ntBASIC4□□□□□ -1.77
NID1P14543 AL359837.1-201ENST00000381357 287 ntBASIC4□□□□□ -1.77
NID1P14543 RNU6-144P-201ENST00000383951 107 ntBASIC4□□□□□ -1.77
NID1P14543 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4□□□□□ -1.77
NID1P14543 AL591034.1-201ENST00000407447 340 ntBASIC4□□□□□ -1.77
NID1P14543 RNU4-43P-201ENST00000410628 137 ntBASIC4□□□□□ -1.77
NID1P14543 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4□□□□□ -1.77
NID1P14543 RPL35AP15-201ENST00000468042 339 ntBASIC4□□□□□ -1.77
NID1P14543 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4□□□□□ -1.77
NID1P14543 RN7SL176P-201ENST00000580352 264 ntBASIC4□□□□□ -1.77
NID1P14543 MIR92B-201ENST00000607575 96 ntBASIC4□□□□□ -1.77
NID1P14543 MIR6716-201ENST00000613413 80 ntBASIC4□□□□□ -1.77
NID1P14543 AC039056.2-201ENST00000622261 511 ntBASIC4□□□□□ -1.77
NID1P14543 AC012640.5-201ENST00000623897 319 ntBASIC4□□□□□ -1.77
NID1P14543 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4□□□□□ -1.77
NID1P14543 MIR6715B-201ENST00000637172 77 ntBASIC4□□□□□ -1.77
NID1P14543 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NID1P14543 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4□□□□□ -1.77
NID1P14543 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NID1P14543 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NID1P14543 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.99□□□□□ -1.77
NID1P14543 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NID1P14543 AC010300.1-201ENST00000600671 5134 ntBASIC3.99□□□□□ -1.77
NID1P14543 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
NID1P14543 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NID1P14543 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NID1P14543 RNA5SP388-201ENST00000362584 119 ntBASIC3.99□□□□□ -1.77
NID1P14543 Y_RNA.243-201ENST00000364481 109 ntBASIC3.99□□□□□ -1.77
NID1P14543 RNA5SP509-201ENST00000364577 119 ntBASIC3.99□□□□□ -1.77
NID1P14543 Y_RNA.310-201ENST00000365063 113 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms