Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD8P13378 U2.21-201ENST00000637295 81 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD8P13378 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXD8P13378 AL109809.4-201ENST00000603520 2185 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD8P13378 Y_RNA.7-201ENST00000362352 102 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 Y_RNA.182-201ENST00000363880 111 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 RNA5SP51-201ENST00000364750 119 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 RNU6-959P-201ENST00000384671 107 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 Y_RNA.580-201ENST00000391004 95 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 RNA5SP239-201ENST00000410218 129 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC012306.1-201ENST00000423267 114 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 RAB28P5-201ENST00000427490 651 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC078809.1-201ENST00000427601 140 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD8P13378 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXD8P13378 RPS15AP5-201ENST00000436276 388 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXD8P13378 RPL39P29-201ENST00000447779 157 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 RNA5SP154-201ENST00000516193 111 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 RNU6-581P-201ENST00000516214 105 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 IGKV2D-19-201ENST00000523346 262 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 SNORA62.6-201ENST00000606322 83 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC019176.2-201ENST00000611579 315 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC004467.1-201ENST00000615678 330 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 MIR3529-201ENST00000637713 78 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXD8P13378 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HOXD8P13378 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXD8P13378 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD8P13378 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXD8P13378 ZNF962P-201ENST00000443465 3140 ntBASIC4.24□□□□□ -1.73
HOXD8P13378 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD8P13378 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HOXD8P13378 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD8P13378 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HOXD8P13378 RNU6-653P-201ENST00000363074 106 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 RNU4-17P-201ENST00000365598 141 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 Y_RNA.400-201ENST00000383963 111 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 RNU6-1310P-201ENST00000384153 107 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 RNU6-793P-201ENST00000384233 104 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 MIR183-201ENST00000384958 110 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 MIR93-201ENST00000385024 80 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 MIR634-201ENST00000385208 97 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 RNU6-735P-201ENST00000410612 107 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD8P13378 HMGN2P31-201ENST00000432430 273 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AL162725.1-201ENST00000435405 301 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD8P13378 HMGN2P21-201ENST00000447764 270 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD8P13378 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXD8P13378 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD8P13378 GNRHR2P1-201ENST00000555315 631 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AC009163.5-201ENST00000575421 637 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AL451007.1-201ENST00000595491 289 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 DEFB117-201ENST00000602356 141 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AL133393.1-201ENST00000603277 287 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AL391261.4-201ENST00000616012 481 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AC012314.7-201ENST00000619693 93 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 AC091932.3-201ENST00000624223 323 ntBASIC4.23□□□□□ -1.73
HOXD8P13378 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD8P13378 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD8P13378 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
HOXD8P13378 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXD8P13378 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD8P13378 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXD8P13378 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXD8P13378 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXD8P13378 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD8P13378 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXD8P13378 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HOXD8P13378 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXD8P13378 AL133412.1-201ENST00000380194 2992 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXD8P13378 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 RNU6-1272P-201ENST00000362776 107 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 Y_RNA.101-201ENST00000363154 102 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 RNA5SP197-201ENST00000363357 119 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 RNU6-727P-201ENST00000363592 107 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 Y_RNA.238-201ENST00000364441 102 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 MIR888-201ENST00000401186 77 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 MIR320B2-201ENST00000408479 138 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 NDUFS5P4-201ENST00000412983 318 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 AC019205.3-201ENST00000424573 156 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXD8P13378 RPS20P10-201ENST00000451209 253 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 RPL26P9-201ENST00000457466 433 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXD8P13378 AC110768.1-201ENST00000509222 400 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 RAC1P2-201ENST00000511164 579 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 SNORA31.23-201ENST00000517219 133 ntBASIC4.22□□□□□ -1.73
HOXD8P13378 SNORA70.24-201ENST00000517233 118 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms