Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 RNU5E-1-201ENST00000362477 120 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 Y_RNA.41-201ENST00000362646 102 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 RNU6-188P-201ENST00000364207 107 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 Y_RNA.251-201ENST00000364551 99 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 SNORA4.3-201ENST00000365564 137 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 SNORA20.2-201ENST00000383922 131 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 RNU6-533P-201ENST00000384144 107 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 RPS3AP36-201ENST00000398190 775 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 MTCYBP5-201ENST00000423752 1135 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 EIF4EP4-201ENST00000424916 578 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 MTCO3P46-201ENST00000425787 232 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.19□□□□□ -2.22
COL11A1P12107 MTCO3P5-201ENST00000433620 714 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.19□□□□□ -2.22
COL11A1P12107 MTCO2P16-201ENST00000436962 677 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 MTND4P32-201ENST00000437189 1237 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.19□□□□□ -2.22
COL11A1P12107 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 AL583843.1-201ENST00000456070 346 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 RAP1BP2-201ENST00000478270 544 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC079382.1-201ENST00000493346 557 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 RNU6-410P-201ENST00000517006 107 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.19□□□□□ -2.22
COL11A1P12107 Z84480.1-201ENST00000605131 311 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AP002360.4-201ENST00000606980 481 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC022893.3-201ENST00000607665 437 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 MTND5P42-201ENST00000637720 498 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 NACAP2-201ENST00000318548 624 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 SNORD56.2-201ENST00000363242 71 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 RNU4-66P-201ENST00000365199 138 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 RNU6-456P-201ENST00000384493 107 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 Y_RNA.553-201ENST00000384670 102 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AL590002.1-201ENST00000406554 418 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 RNU2-3P-201ENST00000410144 191 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 RNU2-33P-201ENST00000410344 192 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AL663109.1-201ENST00000411498 844 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC010153.1-201ENST00000432862 727 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AL353706.1-201ENST00000436728 494 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 FABP5P14-201ENST00000437273 393 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 MTND4P25-201ENST00000441039 533 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.18□□□□□ -2.22
COL11A1P12107 BRK1P2-201ENST00000442875 223 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 NEFMP1-201ENST00000443423 1006 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC079781.2-201ENST00000446424 169 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.18□□□□□ -2.22
COL11A1P12107 AC013267.1-201ENST00000458227 267 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.18□□□□□ -2.22
COL11A1P12107 RPL37P6-201ENST00000460682 294 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AL121769.1-201ENST00000469473 401 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.18□□□□□ -2.22
COL11A1P12107 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.18□□□□□ -2.22
COL11A1P12107 AC079140.3-201ENST00000511111 550 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.18□□□□□ -2.22
COL11A1P12107 MIR892C-201ENST00000516410 77 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 RNU6-314P-201ENST00000516574 104 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.18□□□□□ -2.22
COL11A1P12107 CR383656.8-201ENST00000549046 145 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.18□□□□□ -2.22
COL11A1P12107 AC093012.1-202ENST00000549403 582 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.18□□□□□ -2.22
COL11A1P12107 AC008121.1-201ENST00000603244 268 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC091805.2-201ENST00000603848 235 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC245008.1-201ENST00000608123 476 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AC073114.1-201ENST00000612027 490 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 AL589743.7-201ENST00000612637 233 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 U4atac.1-201ENST00000618345 95 ntBASIC1.18□□□□□ -2.22
COL11A1P12107 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
COL11A1P12107 Y_RNA.68-201ENST00000362881 102 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 RNU6-1167P-201ENST00000363227 94 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 Y_RNA.201-201ENST00000364052 96 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 RNU4-40P-201ENST00000364351 143 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 SNORA23-201ENST00000365128 182 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 RNU6-259P-201ENST00000383999 107 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 RNU6-1042P-201ENST00000384204 107 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 RNU6-166P-201ENST00000384371 107 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 SNORA40.19-201ENST00000390846 128 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 AL590383.1-201ENST00000428602 75 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 AC007919.1-201ENST00000429380 217 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 MTCO2P11-201ENST00000431069 680 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 AL627311.1-201ENST00000431514 115 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 AL512844.2-201ENST00000433990 593 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.17□□□□□ -2.22
COL11A1P12107 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.17□□□□□ -2.22
COL11A1P12107 MTCO1P19-201ENST00000443487 500 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.17□□□□□ -2.22
COL11A1P12107 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.17□□□□□ -2.22
COL11A1P12107 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.17□□□□□ -2.22
COL11A1P12107 RNU6-927P-201ENST00000516199 100 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 RNU6-1315P-201ENST00000517187 99 ntBASIC1.17□□□□□ -2.22
COL11A1P12107 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms