Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PF4V1P10720 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PF4V1P10720 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PF4V1P10720 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3□□□□□ -1.93
PF4V1P10720 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3□□□□□ -1.93
PF4V1P10720 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PF4V1P10720 RNA5SP124-201ENST00000362739 110 ntBASIC3□□□□□ -1.93
PF4V1P10720 RNA5SP322-201ENST00000363617 119 ntBASIC3□□□□□ -1.93
PF4V1P10720 RNA5SP125-201ENST00000364843 120 ntBASIC3□□□□□ -1.93
PF4V1P10720 Y_RNA.314-201ENST00000365114 102 ntBASIC3□□□□□ -1.93
PF4V1P10720 RNU6-474P-201ENST00000384243 107 ntBASIC3□□□□□ -1.93
PF4V1P10720 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
PF4V1P10720 RNA5SP492-201ENST00000411330 114 ntBASIC3□□□□□ -1.93
PF4V1P10720 ATP5HP2-201ENST00000433885 485 ntBASIC3□□□□□ -1.93
PF4V1P10720 AC132942.1-201ENST00000486753 483 ntBASIC3□□□□□ -1.93
PF4V1P10720 ANXA2P1-201ENST00000505539 926 ntBASIC3□□□□□ -1.93
PF4V1P10720 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3□□□□□ -1.93
PF4V1P10720 AC091144.1-201ENST00000519573 138 ntBASIC3□□□□□ -1.93
PF4V1P10720 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
PF4V1P10720 AC023043.3-201ENST00000593113 385 ntBASIC3□□□□□ -1.93
PF4V1P10720 DLEU1_1.1-201ENST00000618107 190 ntBASIC3□□□□□ -1.93
PF4V1P10720 AC243829.7-201ENST00000633081 225 ntBASIC3□□□□□ -1.93
PF4V1P10720 AC012442.3-202ENST00000636742 206 ntBASIC3□□□□□ -1.93
PF4V1P10720 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3□□□□□ -1.93
PF4V1P10720 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
PF4V1P10720 BX322639.1-202ENST00000423987 2213 ntBASIC3□□□□□ -1.93
PF4V1P10720 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PF4V1P10720 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PF4V1P10720 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PF4V1P10720 RNU6-874P-201ENST00000362390 105 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 SNORA63.1-201ENST00000362493 131 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 SNORA71.3-201ENST00000362582 128 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 Y_RNA.106-201ENST00000363189 100 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 RNU5F-3P-201ENST00000363767 117 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.99□□□□□ -1.93
PF4V1P10720 SNORA5A-201ENST00000384111 134 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.99□□□□□ -1.93
PF4V1P10720 MIR1294-201ENST00000408503 142 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 U3.39-201ENST00000408569 239 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 RPS29P4-201ENST00000414733 161 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 USP9YP16-201ENST00000430287 407 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.99□□□□□ -1.93
PF4V1P10720 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.99□□□□□ -1.93
PF4V1P10720 USP9YP23-201ENST00000455085 407 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 RPS27P29-201ENST00000463110 252 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.99□□□□□ -1.93
PF4V1P10720 HSPE1P18-201ENST00000517602 280 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 AC026403.1-201ENST00000518938 295 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 SNRPGP17-201ENST00000603780 214 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 SNRPGP20-201ENST00000604477 205 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 U3.45-201ENST00000607547 219 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 U4atac.1-201ENST00000618345 95 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.99□□□□□ -1.93
PF4V1P10720 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.99□□□□□ -1.93
PF4V1P10720 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PF4V1P10720 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PF4V1P10720 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PF4V1P10720 AL355596.1-201ENST00000565399 3996 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PF4V1P10720 RNU6-944P-201ENST00000364023 107 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RNA5SP387-201ENST00000364226 106 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 Y_RNA.496-201ENST00000384444 101 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 MIR199A2-201ENST00000385289 110 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PF4V1P10720 SNORA69.1-201ENST00000390904 137 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 SNORA12-201ENST00000391162 147 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RNU1-139P-201ENST00000391307 165 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 UBA52P6-201ENST00000399822 382 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AL035423.1-201ENST00000420331 213 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.98□□□□□ -1.93
PF4V1P10720 MTCYBP6-201ENST00000441810 138 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.98□□□□□ -1.93
PF4V1P10720 RNU7-87P-201ENST00000459343 62 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AP000870.1-201ENST00000472927 406 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RPS29P2-201ENST00000479278 136 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RN7SKP18-201ENST00000516005 275 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RNU6-1114P-201ENST00000516022 107 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RNU1-95P-201ENST00000516357 160 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RNU1-128P-201ENST00000516704 160 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 RNU6-1153P-201ENST00000516760 105 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 MIR2355-201ENST00000517199 87 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.98□□□□□ -1.93
PF4V1P10720 AC090517.1-201ENST00000569307 266 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AC090617.3-201ENST00000573670 475 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AC016727.2-201ENST00000603988 621 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AL138825.1-201ENST00000618587 192 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.98□□□□□ -1.93
PF4V1P10720 AC009093.8-201ENST00000641769 292 ntBASIC2.98□□□□□ -1.93
PF4V1P10720 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.98□□□□□ -1.93
PF4V1P10720 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PF4V1P10720 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.97□□□□□ -1.93
PF4V1P10720 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.97□□□□□ -1.93
PF4V1P10720 AC135776.4-201ENST00000624300 1904 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PF4V1P10720 MTND5P16-201ENST00000460269 1703 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 RNU6-280P-201ENST00000364145 104 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 Y_RNA.333-201ENST00000365274 102 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 SNORA70.4-201ENST00000365509 134 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 RNU6-245P-201ENST00000384020 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms