Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 RNA5SP502-201ENST00000362694 119 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 RNU1-100P-201ENST00000365255 165 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.435-201ENST00000384095 112 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 RNU6-1289P-201ENST00000384431 106 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 SNORA48.2-201ENST00000390926 124 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 CYCSP4-201ENST00000429682 331 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 MTCO1P5-201ENST00000433573 344 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 HLA-N-201ENST00000437516 135 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AC125238.1-201ENST00000448842 249 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 RPL21P9-201ENST00000556149 474 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 MIR3609-201ENST00000582661 80 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AL451007.1-201ENST00000595491 289 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AC241585.2-209ENST00000638217 143 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AL133383.2-201ENST00000622958 2336 ntBASIC4.94□□□□□ -1.62
CSB-PGBD3P0DP91 AF117829.1-206ENST00000621883 3802 ntBASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.446-201ENST00000384178 104 ntBASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 AC016700.2-201ENST00000446011 156 ntBASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 AC008155.2-201ENST00000464337 397 ntBASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 MIR4423-201ENST00000580922 80 ntBASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.93□□□□□ -1.62
CSB-PGBD3P0DP91 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 UBE2WP1-201ENST00000362030 340 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 SNORD116-20-201ENST00000384529 92 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 SNORD20-201ENST00000384550 80 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 SNORD2.1-201ENST00000458762 69 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 RNU7-110P-201ENST00000516891 62 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 AL391261.3-201ENST00000557194 520 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 HSPE1P7-201ENST00000604681 321 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 AL137849.1-201ENST00000604767 169 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 MIR6076-201ENST00000617521 113 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 AC091895.1-201ENST00000624494 256 ntBASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.92□□□□□ -1.62
CSB-PGBD3P0DP91 AL049781.1-201ENST00000623195 3585 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC009541.1-201ENST00000438279 2662 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RNA5SP361-201ENST00000362686 118 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RNU6-879P-201ENST00000364328 108 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RNU4-9P-201ENST00000364951 139 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 MIR128-1-201ENST00000384921 82 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.580-201ENST00000391004 95 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RPL23AP48-201ENST00000406913 488 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RNA5SP120-201ENST00000410900 112 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RNU6-1245P-201ENST00000411130 106 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC009296.1-201ENST00000443146 155 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC115115.1-201ENST00000449927 248 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC073901.1-201ENST00000462471 408 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 SNORA70.18-201ENST00000516696 98 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RPL23AP88-201ENST00000605759 454 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 AC002076.2-201ENST00000617362 122 ntBASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSB-PGBD3P0DP91 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.272-201ENST00000364696 102 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-1280P-201ENST00000365211 107 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-17P-201ENST00000384245 107 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-18P-201ENST00000384527 107 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-21P-201ENST00000384710 107 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.568-201ENST00000384742 113 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNA5SP424-201ENST00000390988 115 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNA5SP213-201ENST00000391031 106 ntBASIC4.9□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms