Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
RB1P06400 ZNF72P-201ENST00000425869 1908 ntBASIC2.58□□□□□ -2
RB1P06400 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RB1P06400 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RB1P06400 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
RB1P06400 RNU6-212P-201ENST00000362642 104 ntBASIC2.58□□□□□ -2
RB1P06400 SNORA67.1-201ENST00000364749 141 ntBASIC2.58□□□□□ -2
RB1P06400 MIR764-201ENST00000390811 85 ntBASIC2.58□□□□□ -2
RB1P06400 MIR1277-201ENST00000408536 78 ntBASIC2.58□□□□□ -2
RB1P06400 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.58□□□□□ -2
RB1P06400 AC008267.5-201ENST00000424928 265 ntBASIC2.58□□□□□ -2
RB1P06400 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.58□□□□□ -2
RB1P06400 AC124916.1-201ENST00000444020 547 ntBASIC2.58□□□□□ -2
RB1P06400 snoU13.14-201ENST00000459372 104 ntBASIC2.58□□□□□ -2
RB1P06400 RPL30P12-201ENST00000474666 353 ntBASIC2.58□□□□□ -2
RB1P06400 AC092989.1-201ENST00000481235 277 ntBASIC2.58□□□□□ -2
RB1P06400 RNU6-991P-201ENST00000516168 107 ntBASIC2.58□□□□□ -2
RB1P06400 RNU2-53P-201ENST00000516257 147 ntBASIC2.58□□□□□ -2
RB1P06400 AP000763.2-201ENST00000540641 163 ntBASIC2.58□□□□□ -2
RB1P06400 AC025423.5-201ENST00000550230 219 ntBASIC2.58□□□□□ -2
RB1P06400 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.58□□□□□ -2
RB1P06400 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.58□□□□□ -2
RB1P06400 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
RB1P06400 AC107304.1-201ENST00000604229 296 ntBASIC2.58□□□□□ -2
RB1P06400 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
RB1P06400 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RB1P06400 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.58□□□□□ -2
RB1P06400 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.57□□□□□ -2
RB1P06400 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
RB1P06400 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RB1P06400 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
RB1P06400 Y_RNA.40-201ENST00000362645 93 ntBASIC2.57□□□□□ -2
RB1P06400 RNU6-655P-201ENST00000362858 107 ntBASIC2.57□□□□□ -2
RB1P06400 RNA5SP125-201ENST00000364843 120 ntBASIC2.57□□□□□ -2
RB1P06400 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RB1P06400 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
RB1P06400 RNU6-332P-201ENST00000391193 108 ntBASIC2.57□□□□□ -2
RB1P06400 RNA5SP118-201ENST00000410385 109 ntBASIC2.57□□□□□ -2
RB1P06400 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.57□□□□□ -2
RB1P06400 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.57□□□□□ -2
RB1P06400 AC243964.1-201ENST00000441814 261 ntBASIC2.57□□□□□ -2
RB1P06400 AL359672.1-201ENST00000442302 409 ntBASIC2.57□□□□□ -2
RB1P06400 MTCO2P3-201ENST00000442543 421 ntBASIC2.57□□□□□ -2
RB1P06400 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.57□□□□□ -2
RB1P06400 RPL39P29-201ENST00000447779 157 ntBASIC2.57□□□□□ -2
RB1P06400 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.57□□□□□ -2
RB1P06400 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.57□□□□□ -2
RB1P06400 RPS29P25-201ENST00000481709 171 ntBASIC2.57□□□□□ -2
RB1P06400 AC107222.1-201ENST00000510899 637 ntBASIC2.57□□□□□ -2
RB1P06400 HSPE1P18-201ENST00000517602 280 ntBASIC2.57□□□□□ -2
RB1P06400 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.57□□□□□ -2
RB1P06400 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.57□□□□□ -2
RB1P06400 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.57□□□□□ -2
RB1P06400 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.57□□□□□ -2
RB1P06400 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.57□□□□□ -2
RB1P06400 AC091135.1-201ENST00000585943 307 ntBASIC2.57□□□□□ -2
RB1P06400 AL713866.2-201ENST00000603579 219 ntBASIC2.57□□□□□ -2
RB1P06400 AC104458.1-201ENST00000608243 463 ntBASIC2.57□□□□□ -2
RB1P06400 FAM157A-202ENST00000615155 405 ntBASIC2.57□□□□□ -2
RB1P06400 AC009233.1-201ENST00000616477 371 ntBASIC2.57□□□□□ -2
RB1P06400 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
RB1P06400 AC080100.1-201ENST00000624239 5356 ntBASIC2.57□□□□□ -2
RB1P06400 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RB1P06400 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RB1P06400 RNU6-529P-201ENST00000363383 104 ntBASIC2.56□□□□□ -2
RB1P06400 Y_RNA.373-201ENST00000365600 103 ntBASIC2.56□□□□□ -2
RB1P06400 RNU6-692P-201ENST00000384496 107 ntBASIC2.56□□□□□ -2
RB1P06400 RNU6-1222P-201ENST00000384615 107 ntBASIC2.56□□□□□ -2
RB1P06400 MIR544A-201ENST00000384855 91 ntBASIC2.56□□□□□ -2
RB1P06400 RNU6-1106P-201ENST00000390845 107 ntBASIC2.56□□□□□ -2
RB1P06400 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.56□□□□□ -2
RB1P06400 CYCSP48-201ENST00000417124 323 ntBASIC2.56□□□□□ -2
RB1P06400 RPS15AP10-201ENST00000432472 382 ntBASIC2.56□□□□□ -2
RB1P06400 AL603825.1-201ENST00000438481 80 ntBASIC2.56□□□□□ -2
RB1P06400 AC090515.1-201ENST00000465295 476 ntBASIC2.56□□□□□ -2
RB1P06400 AL121594.1-201ENST00000475906 575 ntBASIC2.56□□□□□ -2
RB1P06400 MTCYBP18-201ENST00000501056 747 ntBASIC2.56□□□□□ -2
RB1P06400 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.56□□□□□ -2
RB1P06400 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
RB1P06400 RPL30P11-203ENST00000598995 310 ntBASIC2.56□□□□□ -2
RB1P06400 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.56□□□□□ -2
RB1P06400 AC007014.2-201ENST00000615581 479 ntBASIC2.56□□□□□ -2
RB1P06400 HMGB1P24-202ENST00000615653 685 ntBASIC2.56□□□□□ -2
RB1P06400 AL159153.1-201ENST00000619688 317 ntBASIC2.56□□□□□ -2
RB1P06400 MIR3662-201ENST00000637030 95 ntBASIC2.56□□□□□ -2
RB1P06400 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RB1P06400 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
RB1P06400 Y_RNA.100-201ENST00000363141 102 ntBASIC2.55□□□□□ -2
RB1P06400 RNU6-1210P-201ENST00000363775 107 ntBASIC2.55□□□□□ -2
RB1P06400 Y_RNA.530-201ENST00000384587 101 ntBASIC2.55□□□□□ -2
RB1P06400 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
RB1P06400 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.55□□□□□ -2
RB1P06400 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.55□□□□□ -2
RB1P06400 RNU2-63P-201ENST00000410792 194 ntBASIC2.55□□□□□ -2
RB1P06400 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.55□□□□□ -2
RB1P06400 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.55□□□□□ -2
RB1P06400 NDUFA5P4-201ENST00000436704 385 ntBASIC2.55□□□□□ -2
RB1P06400 MRPL50P4-201ENST00000446432 475 ntBASIC2.55□□□□□ -2
RB1P06400 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.55□□□□□ -2
RB1P06400 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms